SMTL ID : 7p8x.1

Crystal Structure of leukotoxin LukE from Staphylococcus aureus in complex with a doubly sulfated CCR2 N-terminal peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x ACE- ASP- TYS- ASP- TYS- GLY: C-C chemokine receptor type 2(Non-covalent)

ACE-ASP-TYS-ASP-TYS-GLY.1: 12 residues within 4Å: Chain A: K.42, W.43, R.75, S.79, K.82, R.91, I.93, R.253, L.255, I.257, Y.259, R.280 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.93, A:L.255 Hydrogen bonds: A:W.43, A:K.82, A:Y.259 Water bridges: A:R.75, A:R.75, A:S.77, A:D.80 Salt bridges: A:R.75, A:R.91, A:R.253, A:R.280 pi-Cation interactions: A:R.91, A:R.280

1 x IMD: IMIDAZOLE(Non-covalent)

IMD.2: 3 residues within 4Å: Chain A: H.193, R.272, H.274 1 PLIP interactions: 1 interactions with chain A pi-Stacking: A:H.274

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain A: D.56, K.57, K.239 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.56, A:D.56 Water bridges: A:K.57, A:D.62 Salt bridges: A:K.57, A:K.239 SO4.4: 2 residues within 4Å: Chain A: K.291, T.292 2 PLIP interactions: 2 interactions with chain A Water bridges: A:N.289 Salt bridges: A:K.291

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lambey, P. et al., Structural insights into recognition of chemokine receptors by Staphylococcus aureus leukotoxins. Elife (2022)

Release Date

2022-04-06

Peptides

Leucotoxin LukEv: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Leucotoxin LukEv

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