SMTL ID : 7pek.1 (1 other biounit)

Crystal structure of Triosephosphate Isomerase C216A mutant from Schizosaccharomyces pombe (SpTIM C216A)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: K.12, A.168, I.169, G.170, S.210, G.231, G.232 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:G.170, A:S.210, A:G.231, A:G.232 Water bridges: A:K.12, A:K.12, A:V.211, A:A.233, A:A.233 Salt bridges: A:K.12 SO4.2: 2 residues within 4Å: Chain A: K.56, K.57 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.57 SO4.3: 3 residues within 4Å: Chain B: S.210, G.231, G.232 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:S.210, B:G.232 Water bridges: B:K.12, B:K.12, B:V.211, B:G.231, B:G.231 Salt bridges: B:K.12 SO4.4: 2 residues within 4Å: Chain B: R.134, Q.179 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.179 Salt bridges: B:R.134

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 2 residues within 4Å: Chain B: K.56, K.57 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.57 GOL.6: 6 residues within 4Å: Chain B: K.114, L.117, E.118, V.153, Q.154, N.155 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:E.118, B:Q.154, B:N.155, B:N.155 GOL.7: 3 residues within 4Å: Chain A: I.101, F.102 Chain B: F.108 3 PLIP interactions: 3 interactions with chain B Water bridges: B:D.68, B:S.105, B:S.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Romero-Romero, S. et al., Crystal structure of Triosephosphate Isomerase from Schizosaccharomyces pombe (SpTIM C216A). To Be Published

Release Date

2022-08-24

Peptides

Triosephosphate isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Triosephosphate isomerase

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