SMTL ID : 7pek.2 (1 other biounit)

Crystal structure of Triosephosphate Isomerase C216A mutant from Schizosaccharomyces pombe (SpTIM C216A)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: K.12, A.168, I.169, G.170, S.210, G.231, G.232 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:A.168, A:G.170, A:S.210, A:G.231, A:G.232 Water bridges: A:K.12, A:K.12, A:G.172, A:G.209, A:A.233 Salt bridges: A:K.12 SO4.2: 2 residues within 4Å: Chain A: K.56, K.57 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.57 SO4.6: 3 residues within 4Å: Chain B: S.210, G.231, G.232 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:V.211, B:G.231, B:G.232 Water bridges: B:K.12, B:K.12, B:K.12, B:A.233 Salt bridges: B:K.12 SO4.7: 2 residues within 4Å: Chain B: S.105, F.108 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.105

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 4 residues within 4Å: Chain A: Q.154, N.155, W.156, S.157 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.155, A:W.156, A:S.157, A:S.157, A:S.157 Water bridges: A:K.158

2 x NA: SODIUM ION(Non-functional Binders)

NA.4: 5 residues within 4Å: Chain A: H.95, S.96, C.126, E.164, I.169 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.95, A:S.96, A:E.164 NA.5: 5 residues within 4Å: Chain A: N.10, K.12, H.95, E.164, L.229 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.10, A:H.95 Water bridges: A:K.12

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Romero-Romero, S. et al., Crystal structure of Triosephosphate Isomerase from Schizosaccharomyces pombe (SpTIM C216A). To Be Published

Release Date

2022-08-24

Peptides

Triosephosphate isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Triosephosphate isomerase

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