- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-1-1-1-1-2-mer
- Ligands
- 2 x OEX: CA-MN4-O5 CLUSTER(Non-covalent)
OEX.1: 11 residues within 4Å:- Chain A: Q.157, D.162, V.177, E.181, H.324, E.325, H.329, D.334, A.336
- Chain D: E.330, R.333
11 PLIP interactions:7 interactions with chain A, 4 interactions with chain D- Metal complexes: A:D.162, A:H.324, A:E.325, A:E.325, A:D.334, A:D.334, A:A.336, D:E.330, D:E.330
- Hydrogen bonds: D:R.333, D:R.333
OEX.167: 11 residues within 4Å:- Chain 1: E.330, R.333
- Chain Y: Y.153, D.162, V.177, E.181, H.324, E.325, H.329, D.334, A.336
10 PLIP interactions:6 interactions with chain Y, 4 interactions with chain 1- Metal complexes: Y:E.181, Y:E.181, Y:H.324, Y:E.325, Y:E.325, Y:D.334, 1:E.330, 1:E.330
- Hydrogen bonds: 1:R.333, 1:R.333
- 2 x FE2: FE (II) ION(Non-covalent)
FE2.2: 6 residues within 4Å:- Chain A: H.207, H.264
- Chain E: H.210, Y.240, H.264
- Ligands: BCT.66
3 PLIP interactions:2 interactions with chain E, 1 interactions with chain A- Metal complexes: E:H.210, E:H.264, A:H.264
FE2.168: 6 residues within 4Å:- Chain 2: H.210, Y.240, H.264
- Chain Y: H.207, H.264
- Ligands: BCT.232
3 PLIP interactions:2 interactions with chain 2, 1 interactions with chain Y- Metal complexes: 2:H.210, 2:H.264, Y:H.264
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.3: 4 residues within 4Å:- Chain A: N.173, H.324, E.325
- Chain E: K.313
Ligand excluded by PLIPCL.4: 4 residues within 4Å:- Chain A: F.331
- Chain D: G.329, E.330, T.331
Ligand excluded by PLIPCL.169: 4 residues within 4Å:- Chain 2: L.317
- Chain Y: V.177, H.324, E.325
Ligand excluded by PLIPCL.170: 2 residues within 4Å:- Chain 1: E.330
- Chain Y: F.331
Ligand excluded by PLIP- 106 x CLA: CHLOROPHYLL A(Non-covalent)
CLA.5: 30 residues within 4Å:- Chain A: F.111, V.115, Y.139, P.142, A.145, A.146, V.149, F.174, M.175, I.176, F.178, Q.179, I.184, L.185, H.190, G.193, V.194, V.197, F.198, I.275, T.278, A.279, I.282
- Chain E: I.178, L.201
- Ligands: CLA.6, CLA.7, PHO.8, CLA.67, LHG.72
22 PLIP interactions:19 interactions with chain A, 3 interactions with chain E,- Hydrophobic interactions: A:F.111, A:F.111, A:V.115, A:Y.139, A:P.142, A:A.145, A:F.174, A:F.178, A:Q.179, A:I.184, A:I.184, A:L.185, A:V.194, A:V.197, A:F.198, A:F.198, A:I.275, A:I.282, E:I.178, E:I.178, E:L.201
- pi-Stacking: A:H.190
CLA.6: 21 residues within 4Å:- Chain A: I.37, Y.40, I.41, F.111, V.149, M.164, I.168, T.171, F.172, M.175
- Chain E: M.194, V.197, A.198, L.201
- Chain L: L.31
- Ligands: CLA.5, PHO.8, CLA.67, PL9.70, LHG.72, LHG.82
7 PLIP interactions:1 interactions with chain E, 6 interactions with chain A,- Hydrophobic interactions: E:V.197, A:Y.40, A:I.41, A:F.111, A:V.149, A:T.171, A:F.172
CLA.7: 19 residues within 4Å:- Chain A: M.191, V.194, A.195, F.198, L.202, W.270
- Chain E: F.149, F.153, F.169, V.171, I.174, F.175, F.177, I.178
- Ligands: CLA.5, PHO.9, DGD.59, CLA.67, LMG.74
13 PLIP interactions:7 interactions with chain E, 6 interactions with chain A,- Hydrophobic interactions: E:F.149, E:F.153, E:F.169, E:F.175, E:F.177, E:I.178, E:I.178, A:V.194, A:A.195, A:F.198, A:L.202, A:W.270
- pi-Stacking: A:F.198
CLA.10: 28 residues within 4Å:- Chain A: V.27, I.28, P.31, T.32, T.35, F.85, Y.86, P.87, I.88, W.89, L.106, H.110, L.113
- Chain I: F.7, V.8, Y.9, V.11, V.12, T.13, F.15
- Chain Q: F.15, I.26, L.30
- Ligands: BCR.11, LMG.13, SPH.14, CLA.44, CLA.45
19 PLIP interactions:11 interactions with chain A, 6 interactions with chain I, 2 interactions with chain Q,- Hydrophobic interactions: A:I.28, A:P.31, A:T.32, A:F.85, A:P.87, A:I.88, A:W.89, A:L.106, I:F.7, I:V.8, I:Y.9, I:V.11, I:V.12, I:F.15, Q:F.15, Q:L.30
- Hydrogen bonds: A:I.88
- Salt bridges: A:H.110
- pi-Stacking: A:H.110
CLA.15: 9 residues within 4Å:- Chain B: W.184, G.185, A.186, F.189
- Chain H: F.42, I.45, I.49
- Ligands: CLA.16, RRX.76
6 PLIP interactions:4 interactions with chain H, 2 interactions with chain B,- Hydrophobic interactions: H:F.42, H:F.42, H:I.45, H:I.49, B:F.189, B:F.189
CLA.16: 26 residues within 4Å:- Chain B: G.188, F.189, A.199, H.200, A.203, L.207, W.246, F.249, V.250, T.254
- Chain E: V.150, L.154, I.155, L.158
- Chain H: F.39, F.42, L.43, I.46, L.47, Y.50
- Ligands: CLA.15, CLA.17, CLA.19, CLA.23, RRX.76, LMG.77
25 PLIP interactions:14 interactions with chain B, 6 interactions with chain H, 5 interactions with chain E,- Hydrophobic interactions: B:F.189, B:A.199, B:A.203, B:L.207, B:W.246, B:W.246, B:W.246, B:W.246, B:F.249, B:F.249, B:V.250, B:V.250, H:F.39, H:F.42, H:L.43, H:I.46, H:L.47, H:L.47, E:V.150, E:L.154, E:L.154, E:I.155, E:L.158
- pi-Stacking: B:F.189
- pi-Cation interactions: B:H.200
CLA.17: 26 residues within 4Å:- Chain B: R.67, L.68, A.145, L.148, C.149, F.152, V.197, H.200, H.201, A.204, W.246, A.247, V.250, V.251, A.261
- Chain H: I.36, F.39, A.40, L.43
- Ligands: CLA.16, CLA.18, CLA.19, CLA.20, CLA.23, CLA.24, RRX.76
15 PLIP interactions:12 interactions with chain B, 3 interactions with chain H,- Hydrophobic interactions: B:L.68, B:A.145, B:L.148, B:L.148, B:F.152, B:A.204, B:W.246, B:A.247, B:V.250, H:F.39, H:F.39, H:L.43
- Salt bridges: B:R.67, B:H.201
- pi-Stacking: B:H.201
CLA.18: 25 residues within 4Å:- Chain B: W.32, F.60, V.61, F.64, R.67, L.144, L.148, V.244, A.247, A.248, V.251, F.450, H.454, F.457, A.458, F.461
- Ligands: CLA.17, CLA.19, CLA.20, CLA.21, CLA.25, CLA.26, CLA.27, CLA.29, DGD.36
17 PLIP interactions:17 interactions with chain B,- Hydrophobic interactions: B:W.32, B:F.60, B:V.61, B:F.64, B:L.144, B:L.148, B:L.148, B:V.244, B:A.247, B:A.248, B:V.251, B:F.457, B:F.457, B:F.457, B:F.461, B:F.461
- Salt bridges: B:R.67
CLA.19: 27 residues within 4Å:- Chain B: T.26, V.29, A.30, W.32, A.33, T.37, V.61, F.64, L.65, R.67, L.68, H.99, L.102, L.142, A.145, G.146, A.204, G.208
- Ligands: CLA.16, CLA.17, CLA.18, CLA.20, CLA.24, CLA.26, CLA.27, CLA.29, DGD.36
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:T.26, B:V.29, B:W.32, B:A.33, B:L.68, B:A.145
- Salt bridges: B:R.67
- pi-Stacking: B:H.99, B:H.99
CLA.20: 19 residues within 4Å:- Chain B: L.68, V.70, W.90, S.98, H.99, V.101, L.105, G.151, F.152, F.155, H.156, F.161, P.163
- Ligands: CLA.17, CLA.18, CLA.19, C7Z.33, DGD.36, 4RF.244
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:L.68, B:L.68, B:V.70, B:W.90, B:W.90, B:W.90, B:V.101, B:F.152, B:F.155, B:F.161, B:F.161
- pi-Cation interactions: B:H.156
CLA.21: 24 residues within 4Å:- Chain B: W.32, M.36, F.39, E.40, G.58, F.60, L.323, T.326, G.327, P.446, W.449, F.450
- Chain L: A.29, F.32, I.36
- Chain M: A.8, T.9, F.12
- Ligands: CLA.18, CLA.27, BCR.31, BCR.32, LMG.35, 3PH.37
14 PLIP interactions:10 interactions with chain B, 2 interactions with chain L, 2 interactions with chain M,- Hydrophobic interactions: B:W.32, B:F.39, B:F.60, B:F.60, B:T.326, B:W.449, B:W.449, L:F.32, L:F.32, M:F.12, M:F.12
- pi-Stacking: B:F.60, B:F.60, B:W.449
CLA.22: 23 residues within 4Å:- Chain B: S.238, S.239, A.242, W.246, F.462, H.465, I.466, G.469, T.472, I.473
- Chain E: L.32, F.116, I.119, M.122, L.123, F.126
- Chain H: L.44, L.47
- Ligands: CLA.23, CLA.24, DGA.38, CLA.68, LMG.77
16 PLIP interactions:8 interactions with chain E, 7 interactions with chain B, 1 interactions with chain H,- Hydrophobic interactions: E:L.32, E:F.116, E:F.116, E:F.116, E:I.119, E:L.123, E:L.123, E:F.126, B:A.242, B:W.246, B:F.462, B:F.462, B:I.466, H:L.47
- pi-Stacking: B:H.465
- pi-Cation interactions: B:H.465
CLA.23: 23 residues within 4Å:- Chain B: F.138, L.207, A.211, F.214, H.215, V.218, P.220, L.224, L.228, M.230, W.246
- Chain H: T.28, L.31, M.32, A.40, L.43, L.44
- Ligands: CLA.16, CLA.17, CLA.22, CLA.24, DGA.38, RRX.76
15 PLIP interactions:11 interactions with chain B, 4 interactions with chain H,- Hydrophobic interactions: B:F.138, B:F.138, B:L.207, B:A.211, B:F.214, B:F.214, B:W.246, H:L.31, H:L.43, H:L.44
- Salt bridges: B:H.215
- pi-Stacking: B:H.215, B:H.215, B:H.215
- Hydrogen bonds: H:T.28
CLA.24: 20 residues within 4Å:- Chain B: L.18, H.22, L.134, P.135, I.137, F.138, H.141, L.142, L.144, M.230, I.233, V.236, S.239
- Ligands: CLA.17, CLA.19, CLA.22, CLA.23, CLA.26, CLA.29, RRX.76
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:L.18, B:P.135, B:I.137, B:F.138, B:F.138, B:L.144, B:M.230, B:I.233
- Salt bridges: B:H.141
CLA.25: 23 residues within 4Å:- Chain B: W.4, Y.5, R.6, V.7, H.8, T.9, L.237, I.241, F.457, L.460, F.461, F.463, G.464, W.467, H.468, R.471
- Ligands: CLA.18, CLA.26, CLA.27, CLA.28, BCR.32, LHG.71, LHG.82
13 PLIP interactions:13 interactions with chain B,- Hydrophobic interactions: B:W.4, B:H.8, B:T.9, B:L.237, B:L.237, B:I.241, B:F.457, B:F.461, B:F.461, B:F.463
- Hydrogen bonds: B:H.8
- Salt bridges: B:H.8, B:R.471
CLA.26: 20 residues within 4Å:- Chain B: H.8, V.11, I.12, L.18, V.21, H.22, H.25, T.26, I.233, V.236, L.237, S.240, I.241
- Ligands: CLA.18, CLA.19, CLA.24, CLA.25, CLA.27, CLA.28, CLA.29
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:H.8, B:V.11, B:I.12, B:L.18, B:V.21, B:T.26, B:I.233, B:I.233, B:I.233, B:V.236, B:L.237, B:L.237
- Hydrogen bonds: B:S.240
- Salt bridges: B:H.22
- pi-Cation interactions: B:H.22
CLA.27: 18 residues within 4Å:- Chain B: H.8, H.25, V.29, W.32, V.244, F.457, L.460, F.461
- Ligands: CLA.18, CLA.19, CLA.21, CLA.25, CLA.26, CLA.28, BCR.31, BCR.32, LHG.71, LHG.82
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:V.29, B:V.29, B:W.32, B:W.32, B:V.244, B:F.457
- Salt bridges: B:H.8
- pi-Stacking: B:H.25
CLA.28: 20 residues within 4Å:- Chain B: V.7, H.8, V.10, V.21, M.24, L.28, W.114
- Chain L: Q.9, V.11
- Chain M: L.11, F.19, L.23
- Ligands: CLA.25, CLA.26, CLA.27, BCR.31, SQD.34, LHG.82, SQD.83
- Chain d: F.8
13 PLIP interactions:8 interactions with chain B, 4 interactions with chain M, 1 interactions with chain d,- Hydrophobic interactions: B:V.7, B:V.21, B:V.21, B:M.24, B:L.28, B:W.114, M:L.11, M:F.19, M:F.19, M:L.23, d:F.8
- pi-Stacking: B:H.8
- pi-Cation interactions: B:H.8
CLA.29: 16 residues within 4Å:- Chain B: I.19, H.22, L.23, I.137, I.140, H.141, L.144
- Chain H: L.12, L.15, N.16
- Ligands: CLA.18, CLA.19, CLA.24, CLA.26, CLA.30, C7Z.33
12 PLIP interactions:8 interactions with chain B, 4 interactions with chain H,- Hydrophobic interactions: B:I.19, B:I.137, B:I.137, B:I.140, B:I.140, B:L.144, H:L.12, H:L.12, H:L.15, H:L.15
- Hydrogen bonds: B:H.22
- pi-Stacking: B:H.141
CLA.30: 14 residues within 4Å:- Chain B: I.19, L.23, L.106, A.109, W.112, H.113, L.119, L.121
- Chain H: T.6, L.8, G.9, L.12
- Ligands: CLA.29, C7Z.33
11 PLIP interactions:8 interactions with chain B, 3 interactions with chain H,- Hydrophobic interactions: B:I.19, B:L.23, B:L.106, B:W.112, B:L.119, B:L.121, H:L.8, H:L.12
- pi-Stacking: B:W.112, B:W.112
- Hydrogen bonds: H:T.6
CLA.40: 19 residues within 4Å:- Chain D: T.70, L.71, L.144, G.147, A.148, L.151, I.200, H.213, I.216, L.257, M.258, F.265, A.272, Y.273
- Ligands: CLA.41, CLA.42, CLA.45, CLA.46, BCR.54
12 PLIP interactions:12 interactions with chain D,- Hydrophobic interactions: D:L.144, D:L.151, D:I.216, D:L.257, D:M.258, D:F.265, D:F.265, D:A.272, D:Y.273
- Salt bridges: D:H.213
- pi-Stacking: D:H.213, D:H.213
CLA.41: 29 residues within 4Å:- Chain D: W.39, I.63, L.64, H.67, L.71, Y.73, G.147, L.150, L.151, K.154, F.158, V.255, M.258, A.262, Y.273, L.402, H.406, L.409, G.410, F.413
- Chain V: F.226
- Ligands: CLA.40, CLA.42, CLA.43, CLA.48, CLA.49, CLA.51, LMG.60, CLA.137
20 PLIP interactions:20 interactions with chain D,- Hydrophobic interactions: D:W.39, D:W.39, D:W.39, D:I.63, D:L.64, D:L.71, D:L.151, D:K.154, D:K.154, D:M.258, D:A.262, D:L.402, D:L.409, D:L.409, D:L.409, D:F.413
- Hydrogen bonds: D:Y.273
- Salt bridges: D:H.67, D:H.406
- pi-Stacking: D:H.406
CLA.42: 18 residues within 4Å:- Chain D: I.36, V.37, A.40, N.44, L.64, H.67, I.68, L.71, S.90, H.94, M.258
- Ligands: CLA.40, CLA.41, CLA.48, CLA.49, CLA.51, CLA.52, LMK.65
5 PLIP interactions:5 interactions with chain D,- Hydrophobic interactions: D:V.37, D:A.40
- Salt bridges: D:H.67
- pi-Stacking: D:H.94, D:H.94
CLA.43: 19 residues within 4Å:- Chain D: W.39, M.43, F.46, E.47, G.61, I.63, S.382, W.401, L.402, S.405
- Chain K: P.17, V.21
- Ligands: SQD.12, CLA.41, CLA.47, CLA.49, DGD.58, DGD.59, LMG.60
10 PLIP interactions:8 interactions with chain D, 2 interactions with chain K,- Hydrophobic interactions: D:W.39, D:I.63, D:I.63, D:W.401, D:W.401, D:W.401, D:L.402, K:P.17, K:V.21
- pi-Stacking: D:W.401
CLA.44: 24 residues within 4Å:- Chain A: F.25, C.109, F.112, L.113, C.116, C.117, M.119, W.123
- Chain D: F.240, S.249, Y.250, A.253, A.254, F.414, H.417, A.421, R.425
- Chain I: F.19, F.23
- Ligands: CLA.10, LMG.13, CLA.46, BCR.54, DGD.57
12 PLIP interactions:5 interactions with chain D, 5 interactions with chain A, 2 interactions with chain I,- Hydrophobic interactions: D:Y.250, D:F.414, A:F.25, A:F.112, A:W.123, A:W.123, I:F.19, I:F.23
- Salt bridges: D:R.425, D:R.425
- pi-Stacking: D:H.417, A:W.123
CLA.45: 23 residues within 4Å:- Chain D: L.137, L.141, I.189, L.219, C.220, G.223, W.226, H.227, T.230, T.231, P.232, W.233, W.235, F.240
- Ligands: CLA.10, LMG.13, CLA.40, CLA.46, BCR.54, LMG.61, DGA.62, CLA.158, SPH.164
11 PLIP interactions:11 interactions with chain D,- Hydrophobic interactions: D:L.137, D:L.137, D:L.141, D:L.141, D:I.189, D:L.219, D:W.226, D:F.240
- Hydrogen bonds: D:W.233
- pi-Stacking: D:H.227
- pi-Cation interactions: D:H.227
CLA.46: 21 residues within 4Å:- Chain D: M.133, T.134, I.136, L.137, H.140, L.144, I.216, F.240, W.242, Y.247, Y.250, S.251, A.254, M.258
- Ligands: CLA.40, CLA.44, CLA.45, CLA.48, BCR.54, DGA.62, CLA.158
17 PLIP interactions:17 interactions with chain D,- Hydrophobic interactions: D:M.133, D:T.134, D:I.136, D:L.137, D:L.144, D:I.216, D:F.240, D:F.240, D:W.242, D:Y.247, D:Y.247, D:Y.250, D:Y.250, D:Y.250, D:A.254
- Hydrogen bonds: D:H.140
- Salt bridges: D:H.140
CLA.47: 23 residues within 4Å:- Chain D: F.9, W.12, A.13, G.14, N.15, A.16, L.248, L.252, L.409, F.412, F.413, V.415, G.416, W.419, H.420, R.423
- Ligands: SQD.12, CLA.43, CLA.48, CLA.49, CLA.50, LMG.60, LHG.73
16 PLIP interactions:16 interactions with chain D,- Hydrophobic interactions: D:N.15, D:L.248, D:L.252, D:L.409, D:F.412, D:F.413, D:F.413, D:V.415, D:W.419
- Hydrogen bonds: D:N.15
- Salt bridges: D:H.420, D:R.423
- pi-Stacking: D:W.419, D:H.420, D:H.420
- pi-Cation interactions: D:H.420
CLA.48: 25 residues within 4Å:- Chain D: N.15, L.18, I.19, L.25, A.28, H.29, H.32, Y.125, W.127, I.136, H.140, L.144, G.244, E.245, Y.247, L.248, S.251, V.255
- Ligands: CLA.41, CLA.42, CLA.46, CLA.47, CLA.49, CLA.50, CLA.51
13 PLIP interactions:13 interactions with chain D,- Hydrophobic interactions: D:N.15, D:L.25, D:A.28, D:W.127, D:W.127, D:I.136, D:L.144, D:Y.247, D:L.248, D:L.248
- Hydrogen bonds: D:S.251
- pi-Stacking: D:H.32
- pi-Cation interactions: D:H.29
CLA.49: 17 residues within 4Å:- Chain D: N.15, H.32, L.35, I.36, W.39, L.409, F.412, F.413
- Chain K: P.20, I.24
- Ligands: CLA.41, CLA.42, CLA.43, CLA.47, CLA.48, CLA.50, LHG.73
12 PLIP interactions:2 interactions with chain K, 10 interactions with chain D,- Hydrophobic interactions: K:P.20, K:I.24, D:L.35, D:W.39, D:W.39, D:L.409, D:F.412, D:F.413
- Hydrogen bonds: D:N.15
- pi-Stacking: D:H.32, D:H.32
- Metal complexes: D:H.32
CLA.50: 31 residues within 4Å:- Chain C: L.32
- Chain D: G.1, R.2, W.11, G.14, N.15, R.17, L.18, K.24, A.28, A.31, H.32, A.99, G.102, F.103, V.106, S.109, L.110
- Chain K: F.23, L.26, W.30, Q.31
- Chain S: L.19, V.20, P.24, A.28
- Ligands: CLA.47, CLA.48, CLA.49, BCR.55, BCR.56
24 PLIP interactions:10 interactions with chain K, 1 interactions with chain C, 10 interactions with chain D, 3 interactions with chain S,- Hydrophobic interactions: K:F.23, K:F.23, K:L.26, K:W.30, K:W.30, K:W.30, K:Q.31, C:L.32, D:W.11, D:L.18, D:K.24, D:A.31, D:F.103, D:L.110, D:L.110, S:V.20, S:P.24, S:A.28
- pi-Stacking: K:W.30, K:W.30, K:W.30
- Hydrogen bonds: D:R.2, D:R.17
- Salt bridges: D:K.24
CLA.51: 22 residues within 4Å:- Chain D: H.29, V.30, A.33, L.101, F.122, F.123, Y.125, I.136, Y.139, H.140, I.142, I.143, C.146, G.147, L.150
- Ligands: CLA.41, CLA.42, CLA.48, CLA.52, BCR.53, LHG.63, SQD.64
12 PLIP interactions:12 interactions with chain D,- Hydrophobic interactions: D:H.29, D:F.122, D:F.123, D:F.123, D:Y.125, D:I.136, D:Y.139, D:I.142, D:I.142, D:L.150
- pi-Stacking: D:H.140
- pi-Cation interactions: D:H.140
CLA.52: 21 residues within 4Å:- Chain D: L.26, V.30, V.100, L.101, G.104, Y.107, H.108, P.113, L.116, Y.120, F.123
- Chain V: P.16, G.18, L.19
- Ligands: CLA.42, CLA.51, BCR.53, LHG.63, SQD.64, LMK.65, CHL.124
17 PLIP interactions:4 interactions with chain V, 13 interactions with chain D,- Hydrophobic interactions: V:P.16, V:L.19, D:V.30, D:V.30, D:V.100, D:L.101, D:Y.107, D:L.116, D:Y.120, D:F.123, D:F.123
- Hydrogen bonds: V:G.18, V:L.19
- Salt bridges: D:H.108
- pi-Stacking: D:H.108, D:F.123, D:F.123
CLA.67: 28 residues within 4Å:- Chain A: M.175, F.198
- Chain E: W.44, L.118, P.145, V.148, F.149, V.152, F.177, I.178, F.181, Q.182, W.187, T.188, H.193, G.196, V.197, V.200, L.201, L.275, S.278, A.279, V.282
- Ligands: CLA.5, CLA.6, CLA.7, PHO.9, LMG.74
16 PLIP interactions:15 interactions with chain E, 1 interactions with chain A,- Hydrophobic interactions: E:W.44, E:L.118, E:F.149, E:F.177, E:I.178, E:I.178, E:F.181, E:Q.182, E:V.197, E:V.200, E:V.200, E:L.201, E:L.275, A:F.198
- pi-Stacking: E:W.187, E:H.193
CLA.68: 22 residues within 4Å:- Chain E: L.31, L.32, P.35, C.36, F.39, L.85, L.86, F.87, V.88, W.89, W.100, G.105, F.109, H.113, F.116
- Chain H: L.37, L.44
- Chain R: L.13, A.17, V.19
- Ligands: CLA.22, DGA.38
15 PLIP interactions:11 interactions with chain E, 2 interactions with chain H, 2 interactions with chain R,- Hydrophobic interactions: E:P.35, E:F.87, E:F.87, E:W.89, E:W.89, E:F.116, H:L.37, H:L.44, R:L.13, R:V.19
- Hydrogen bonds: E:V.88
- Salt bridges: E:H.113
- pi-Stacking: E:F.39, E:F.109, E:H.113
CLA.87: 23 residues within 4Å:- Chain T: L.25, P.30, D.32, Y.33, G.34, W.35, D.36, L.40, S.41, F.47, Y.50, R.51, E.54, R.176, M.179, F.180, L.183
- Ligands: CHL.86, CLA.88, LUT.101, LHG.104, CLA.107, CHL.113
19 PLIP interactions:19 interactions with chain T,- Hydrophobic interactions: T:Y.33, T:W.35, T:W.35, T:W.35, T:L.40, T:F.47, T:Y.50, T:R.51, T:E.54, T:E.54, T:R.176, T:M.179, T:F.180
- Hydrogen bonds: T:D.32, T:Y.33, T:W.35
- Salt bridges: T:R.176
- pi-Stacking: T:W.35
- pi-Cation interactions: T:R.176
CLA.88: 14 residues within 4Å:- Chain T: Y.50, L.53, H.57, F.186
- Chain W: F.38
- Ligands: CLA.87, CHL.92, CHL.94, LUT.101, CLA.107, CHL.145, CLA.146, CLA.147, LUT.160
4 PLIP interactions:4 interactions with chain T,- Hydrophobic interactions: T:Y.50, T:L.53, T:F.186
- pi-Stacking: T:H.57
CLA.89: 20 residues within 4Å:- Chain T: W.60, L.63, L.66, G.67, T.70, P.71, L.74, F.82, S.85, A.91, L.101, N.102, Y.103, I.110, A.151
- Ligands: CHL.91, CHL.93, CLA.95, LUT.101, NEX.103
6 PLIP interactions:6 interactions with chain T,- Hydrophobic interactions: T:W.60, T:L.63, T:L.63, T:L.74, T:L.101
- pi-Stacking: T:Y.103
CLA.95: 18 residues within 4Å:- Chain T: R.59, L.62, L.63, L.146, Y.147, P.148, G.149, F.152, L.157, F.164, L.167, K.168, E.171
- Ligands: CLA.89, CHL.93, CLA.97, LUT.100, NEX.103
11 PLIP interactions:11 interactions with chain T,- Hydrophobic interactions: T:R.59, T:L.62, T:L.63, T:L.63, T:F.152, T:L.157, T:F.164, T:L.167
- Hydrogen bonds: T:R.59, T:G.149
- pi-Cation interactions: T:R.59
CLA.96: 9 residues within 4Å:- Chain T: Q.4, F.5, K.170, K.173, N.174, L.177
- Ligands: CLA.97, LHG.104, XAT.121
5 PLIP interactions:5 interactions with chain T,- Hydrophobic interactions: T:K.173, T:L.177
- Hydrogen bonds: T:N.174
- Salt bridges: T:K.173
- pi-Cation interactions: T:K.173
CLA.97: 7 residues within 4Å:- Chain T: L.66, K.170, N.174, L.177
- Ligands: CLA.95, CLA.96, LUT.100
4 PLIP interactions:4 interactions with chain T,- Hydrophobic interactions: T:L.66, T:L.177
- Salt bridges: T:K.170, T:K.170
CLA.98: 18 residues within 4Å:- Chain T: F.180, L.183, G.184, V.187, Q.188, V.191, T.192, N.199, L.200, H.203, N.210, N.211, A.212, Y.215
- Ligands: CLA.99, LUT.100, LHG.104, XAT.121
11 PLIP interactions:11 interactions with chain T,- Hydrophobic interactions: T:F.180, T:F.180, T:F.180, T:L.183, T:V.187, T:Q.188, T:V.191, T:L.200, T:H.203, T:A.212
- Salt bridges: T:H.203
CLA.99: 9 residues within 4Å:- Chain T: L.200, H.203, L.204, P.207, N.211
- Ligands: CLA.98, LUT.100, LHG.104, XAT.121
6 PLIP interactions:6 interactions with chain T,- Hydrophobic interactions: T:L.200, T:P.207, T:P.207
- Hydrogen bonds: T:N.211
- pi-Stacking: T:H.203
- pi-Cation interactions: T:H.203
CLA.106: 25 residues within 4Å:- Chain U: L.23, P.28, G.29, D.30, Y.31, G.32, W.33, D.34, L.38, S.39, F.45, Y.48, R.49, I.51, E.52, R.175, M.178, F.179, L.182
- Ligands: CHL.105, CLA.107, LUT.120, LHG.123, CLA.147, CHL.153
14 PLIP interactions:14 interactions with chain U,- Hydrophobic interactions: U:Y.31, U:W.33, U:W.33, U:L.38, U:Y.48, U:R.49, U:I.51, U:E.52, U:R.175, U:L.182
- Hydrogen bonds: U:Y.31, U:W.33
- Salt bridges: U:R.175
- pi-Cation interactions: U:R.175
CLA.107: 14 residues within 4Å:- Chain T: L.40
- Chain U: Y.48, H.55, L.182, F.185
- Ligands: CLA.87, CLA.88, CHL.94, LUT.101, CLA.106, CHL.111, CHL.113, LUT.120, CLA.147
6 PLIP interactions:5 interactions with chain U, 1 interactions with chain T,- Hydrophobic interactions: U:L.182, U:F.185, U:F.185, T:L.40
- Hydrogen bonds: U:Y.48
- pi-Stacking: U:H.55
CLA.108: 15 residues within 4Å:- Chain U: W.58, L.61, L.64, G.65, T.68, P.69, L.72, F.80, L.98, Y.100, I.107
- Ligands: CHL.110, CLA.114, LUT.120, NEX.122
8 PLIP interactions:8 interactions with chain U,- Hydrophobic interactions: U:W.58, U:L.61, U:L.61, U:L.64, U:P.69, U:L.72, U:L.98, U:I.107
CLA.114: 19 residues within 4Å:- Chain U: R.57, L.60, L.61, L.64, Y.146, P.147, G.148, F.151, D.152, L.156, F.163, L.166, K.167, E.170
- Ligands: CLA.108, CHL.112, CLA.116, LUT.119, NEX.122
10 PLIP interactions:10 interactions with chain U,- Hydrophobic interactions: U:R.57, U:L.60, U:L.61, U:L.61, U:L.64, U:F.151, U:L.166, U:E.170
- Hydrogen bonds: U:G.148
- pi-Cation interactions: U:R.57
CLA.115: 10 residues within 4Å:- Chain U: F.2, E.165, V.168, K.169, K.172, N.173, L.176
- Ligands: CLA.116, LHG.123, XAT.161
7 PLIP interactions:7 interactions with chain U,- Hydrophobic interactions: U:K.172, U:L.176
- Hydrogen bonds: U:N.173
- Salt bridges: U:K.172
- pi-Cation interactions: U:K.172, U:K.172, U:K.172
CLA.116: 7 residues within 4Å:- Chain U: L.64, L.166, K.169, N.173
- Ligands: CLA.114, CLA.115, LUT.119
3 PLIP interactions:3 interactions with chain U,- Hydrophobic interactions: U:L.64, U:L.166
- Salt bridges: U:K.169
CLA.117: 18 residues within 4Å:- Chain U: F.179, S.180, G.183, V.186, Q.187, V.190, N.198, L.199, H.202, N.210, A.211, S.214
- Chain W: L.117, A.118
- Ligands: CLA.118, LUT.119, LHG.123, XAT.161
11 PLIP interactions:2 interactions with chain W, 9 interactions with chain U,- Hydrophobic interactions: W:L.117, W:A.118, U:F.179, U:V.186, U:Q.187, U:V.190, U:L.199, U:A.211
- Hydrogen bonds: U:A.211, U:S.214
- Salt bridges: U:H.202
CLA.118: 9 residues within 4Å:- Chain U: L.199, H.202, L.203, P.206, F.212
- Chain W: L.114
- Ligands: CLA.117, LUT.119, XAT.161
5 PLIP interactions:4 interactions with chain U, 1 interactions with chain W,- Hydrophobic interactions: U:L.199, U:L.203, U:P.206, W:L.114
- pi-Stacking: U:H.202
CLA.125: 23 residues within 4Å:- Chain V: L.29, L.33, G.35, D.36, Y.37, G.38, Y.39, D.40, L.44, G.45, V.51, Y.54, R.55, E.58, H.61, R.194, M.197, I.198, L.201
- Ligands: CHL.124, CLA.126, LUT.140, LHG.142
21 PLIP interactions:21 interactions with chain V,- Hydrophobic interactions: V:Y.37, V:Y.39, V:L.44, V:V.51, V:Y.54, V:Y.54, V:R.55, V:E.58, V:R.194, V:R.194, V:M.197, V:I.198, V:L.201
- Hydrogen bonds: V:D.36, V:Y.37, V:G.38, V:Y.39
- Salt bridges: V:R.55, V:R.194
- pi-Cation interactions: V:R.55, V:R.194
CLA.126: 6 residues within 4Å:- Chain V: Y.54, N.57, H.61
- Ligands: CLA.125, CLA.132, LUT.140
1 PLIP interactions:1 interactions with chain V,- pi-Stacking: V:H.61
CLA.127: 20 residues within 4Å:- Chain V: W.64, L.67, A.68, A.70, G.71, I.74, P.75, I.85, G.87, T.93, N.104, Y.105, F.106, N.115
- Ligands: CHL.90, CLA.128, CHL.129, CLA.138, LUT.140, NEX.141
9 PLIP interactions:9 interactions with chain V,- Hydrophobic interactions: V:L.67, V:A.70, V:I.74, V:P.75, V:T.93, V:Y.105, V:Y.105
- Hydrogen bonds: V:F.106, V:N.115
CLA.128: 9 residues within 4Å:- Chain V: I.74, Y.105, A.107, V.108, P.109
- Ligands: CHL.90, CLA.127, CLA.133, NEX.141
2 PLIP interactions:2 interactions with chain V,- Hydrophobic interactions: V:A.107, V:V.108
CLA.132: 13 residues within 4Å:- Chain V: N.57, L.60, H.61, W.64, L.130, G.131, E.134, R.137, V.138
- Ligands: CLA.126, CHL.129, CHL.130, LUT.140
7 PLIP interactions:7 interactions with chain V,- Hydrophobic interactions: V:L.60, V:W.64, V:W.64, V:L.130, V:E.134, V:V.138
- Salt bridges: V:R.137
CLA.133: 20 residues within 4Å:- Chain V: R.63, M.66, L.67, Y.165, P.166, G.167, F.170, D.171, N.174, L.175, A.176, F.182, L.185, Q.186, E.189
- Ligands: CHL.90, CLA.128, CHL.131, CLA.135, LUT.139
12 PLIP interactions:12 interactions with chain V,- Hydrophobic interactions: V:R.63, V:M.66, V:L.67, V:L.67, V:F.170, V:L.175, V:A.176, V:L.185, V:E.189, V:E.189
- Hydrogen bonds: V:R.63
- pi-Cation interactions: V:R.63
CLA.134: 13 residues within 4Å:- Chain V: K.5, W.6, I.73, V.187, K.188, K.191, N.192, L.195
- Ligands: LHG.63, CHL.90, CLA.135, LUT.139, LHG.142
7 PLIP interactions:7 interactions with chain V,- Hydrophobic interactions: V:I.73, V:K.188, V:K.191, V:L.195
- Hydrogen bonds: V:N.192
- Salt bridges: V:K.191
- pi-Cation interactions: V:K.191
CLA.135: 10 residues within 4Å:- Chain V: A.70, L.185, K.188, N.192, L.195
- Ligands: NEX.103, CLA.133, CLA.134, LUT.139, LHG.142
5 PLIP interactions:5 interactions with chain V,- Hydrophobic interactions: V:A.70, V:L.185, V:L.195
- Salt bridges: V:K.188, V:K.188
CLA.136: 16 residues within 4Å:- Chain V: I.198, L.201, A.202, I.205, Q.206, V.209, N.217, I.218, H.221, Y.228, N.229, L.230, V.233
- Ligands: CLA.137, LUT.139, LHG.142
10 PLIP interactions:10 interactions with chain V,- Hydrophobic interactions: V:I.198, V:L.201, V:I.205, V:I.205, V:I.218, V:L.230, V:L.230
- Hydrogen bonds: V:Q.206, V:L.230
- Salt bridges: V:H.221
CLA.137: 16 residues within 4Å:- Chain D: L.93, L.150, F.158
- Chain V: I.218, H.221, L.222, P.225, F.226, N.229
- Ligands: CLA.41, SQD.64, LMK.65, CLA.136, LUT.139, LHG.142, LPX.143
10 PLIP interactions:3 interactions with chain D, 7 interactions with chain V,- Hydrophobic interactions: D:L.93, D:L.150, D:F.158, V:I.218, V:L.222, V:P.225, V:P.225, V:F.226
- Hydrogen bonds: V:N.229
- pi-Stacking: V:H.221
CLA.138: 11 residues within 4Å:- Chain V: A.144, G.145, F.146, P.148, F.153, F.158, P.169, F.170
- Ligands: CLA.127, CHL.131, NEX.141
8 PLIP interactions:8 interactions with chain V,- Hydrophobic interactions: V:F.146, V:F.153, V:F.158, V:P.169, V:F.170, V:F.170, V:F.170
- Hydrogen bonds: V:F.146
CLA.146: 25 residues within 4Å:- Chain W: L.23, P.28, G.29, D.30, Y.31, G.32, W.33, D.34, F.38, S.39, F.45, Y.48, R.49, I.51, E.52, R.175, M.178, F.179, L.182
- Ligands: CLA.88, CHL.94, CHL.145, CLA.147, LUT.160, LHG.163
16 PLIP interactions:16 interactions with chain W,- Hydrophobic interactions: W:Y.31, W:W.33, W:W.33, W:F.38, W:F.45, W:Y.48, W:R.49, W:I.51, W:E.52, W:R.175, W:M.178, W:L.182
- Hydrogen bonds: W:Y.31, W:W.33
- Salt bridges: W:R.175
- pi-Cation interactions: W:R.175
CLA.147: 13 residues within 4Å:- Chain U: L.38
- Chain W: H.55, L.182, F.185
- Ligands: CLA.88, CLA.106, CLA.107, CHL.113, LUT.120, CLA.146, CHL.151, CHL.153, LUT.160
4 PLIP interactions:4 interactions with chain W,- Hydrophobic interactions: W:L.182, W:F.185
- pi-Stacking: W:H.55
- pi-Cation interactions: W:H.55
CLA.148: 18 residues within 4Å:- Chain W: W.58, L.61, L.64, G.65, P.69, L.72, F.79, G.83, L.99, N.100, Y.101, L.102, I.108
- Ligands: CHL.149, CHL.150, CLA.154, LUT.160, NEX.162
14 PLIP interactions:14 interactions with chain W,- Hydrophobic interactions: W:W.58, W:L.61, W:L.61, W:L.64, W:L.64, W:P.69, W:L.72, W:L.99, W:Y.101, W:Y.101, W:Y.101, W:L.102, W:I.108
- Hydrogen bonds: W:L.102
CLA.152: 17 residues within 4Å:- Chain W: I.54, R.57, W.58, F.130, R.131, G.134, E.135, A.136, D.143, P.144, L.145, P.147, F.151, P.153
- Ligands: CLA.154, LUT.159, NEX.162
9 PLIP interactions:9 interactions with chain W,- Hydrophobic interactions: W:I.54, W:F.130, W:F.130, W:A.136, W:P.147, W:P.147, W:F.151
- Hydrogen bonds: W:R.57
- pi-Cation interactions: W:R.131
CLA.154: 20 residues within 4Å:- Chain W: R.57, L.60, L.61, L.64, Y.146, P.147, G.148, F.151, D.152, L.156, A.157, F.163, L.166, K.167, E.170
- Ligands: CLA.148, CLA.152, CLA.156, LUT.159, NEX.162
13 PLIP interactions:13 interactions with chain W,- Hydrophobic interactions: W:R.57, W:R.57, W:L.60, W:L.61, W:L.61, W:L.64, W:F.151, W:A.157, W:L.166, W:E.170
- Hydrogen bonds: W:R.57, W:G.148
- pi-Cation interactions: W:R.57
CLA.155: 15 residues within 4Å:- Chain D: W.226
- Chain Q: W.34
- Chain W: W.3, E.165, V.168, K.169, K.172, N.173, L.176
- Ligands: LMG.61, DGA.62, XAT.102, CLA.156, LHG.163, SPH.164
9 PLIP interactions:1 interactions with chain Q, 7 interactions with chain W, 1 interactions with chain D,- Hydrophobic interactions: Q:W.34, W:W.3, W:K.172, W:L.176, D:W.226
- Salt bridges: W:K.172
- pi-Cation interactions: W:K.172, W:K.172, W:K.172
CLA.156: 12 residues within 4Å:- Chain Q: W.34, A.35, F.38
- Chain W: L.64, K.169, N.173, L.176
- Ligands: LMG.61, DGA.62, CLA.154, CLA.155, LUT.159
7 PLIP interactions:5 interactions with chain W, 2 interactions with chain Q,- Hydrophobic interactions: W:L.64, W:L.64, W:L.176, Q:A.35, Q:F.38
- Salt bridges: W:K.169, W:K.169
CLA.157: 21 residues within 4Å:- Chain T: L.119, A.120
- Chain W: F.179, S.180, L.182, G.183, V.186, Q.187, V.190, T.191, N.198, L.199, H.202, N.209, N.210, A.211
- Ligands: XAT.102, CLA.158, LUT.159, LHG.163, PTY.165
10 PLIP interactions:8 interactions with chain W, 2 interactions with chain T,- Hydrophobic interactions: W:F.179, W:L.182, W:V.186, W:Q.187, W:V.190, W:L.199, T:L.119, T:A.120
- Hydrogen bonds: W:A.211
- Salt bridges: W:H.202
CLA.158: 19 residues within 4Å:- Chain D: A.182, W.215, L.222
- Chain T: V.116
- Chain W: L.199, H.202, L.203, P.206, N.210, F.212
- Ligands: CLA.45, CLA.46, LMG.61, XAT.102, CLA.157, LUT.159, LHG.163, SPH.164, PTY.165
9 PLIP interactions:4 interactions with chain D, 4 interactions with chain W, 1 interactions with chain T,- Hydrophobic interactions: D:A.182, D:W.215, D:W.215, D:L.222, W:L.199, W:P.206, W:P.206, T:V.116
- pi-Stacking: W:H.202
CLA.171: 28 residues within 4Å:- Chain 2: I.178
- Chain Y: F.111, V.115, Y.139, P.142, A.145, A.146, V.149, M.175, I.176, F.178, Q.179, I.184, L.185, H.190, G.193, V.194, V.197, F.198, I.275, T.278, A.279, I.282
- Ligands: CLA.172, CLA.173, PHO.174, CLA.233, LHG.238
18 PLIP interactions:17 interactions with chain Y, 1 interactions with chain 2,- Hydrophobic interactions: Y:F.111, Y:V.115, Y:Y.139, Y:P.142, Y:A.145, Y:A.146, Y:M.175, Y:I.176, Y:F.178, Y:Q.179, Y:L.185, Y:V.194, Y:V.197, Y:F.198, Y:I.275, Y:I.282, 2:I.178
- pi-Stacking: Y:H.190
CLA.172: 22 residues within 4Å:- Chain 2: M.194, V.197, A.198, L.201, L.205
- Chain Y: Y.40, I.41, F.111, V.149, F.150, I.168, T.171, F.172, M.175
- Ligands: CLA.171, PHO.174, CLA.233, PL9.236, LHG.238, LHG.247, 3PH.249
- Chain d: L.14
13 PLIP interactions:8 interactions with chain Y, 4 interactions with chain 2, 1 interactions with chain d,- Hydrophobic interactions: Y:Y.40, Y:I.41, Y:F.111, Y:V.149, Y:F.150, Y:F.150, Y:T.171, Y:F.172, 2:V.197, 2:A.198, 2:L.201, 2:L.205, d:L.14
CLA.173: 20 residues within 4Å:- Chain 2: F.149, V.152, F.153, V.171, I.174, F.175, F.177, I.178
- Chain Y: M.191, V.194, A.195, F.198, G.199, L.202, F.203, W.270
- Ligands: CLA.171, PHO.175, CLA.233, LMG.240
13 PLIP interactions:6 interactions with chain 2, 7 interactions with chain Y,- Hydrophobic interactions: 2:F.149, 2:V.152, 2:F.153, 2:F.175, 2:F.177, 2:I.178, Y:V.194, Y:A.195, Y:F.198, Y:F.198, Y:L.202, Y:F.203, Y:W.270
CLA.176: 27 residues within 4Å:- Chain 6: F.7, V.8, Y.9, V.12, T.13, F.15, V.16
- Chain Y: I.28, P.31, T.32, T.35, F.85, P.87, I.88, W.89, L.106, C.109, H.110, L.113
- Ligands: BCR.177, LMG.179, SPH.180, CLA.210, CLA.211
- Chain e: F.15, I.26, L.30
24 PLIP interactions:13 interactions with chain Y, 5 interactions with chain e, 6 interactions with chain 6,- Hydrophobic interactions: Y:I.28, Y:P.31, Y:P.31, Y:T.32, Y:F.85, Y:P.87, Y:I.88, Y:W.89, Y:W.89, Y:L.106, e:F.15, e:F.15, e:I.26, e:I.26, e:L.30, 6:F.7, 6:Y.9, 6:V.12, 6:F.15, 6:F.15, 6:V.16
- Hydrogen bonds: Y:I.88
- Salt bridges: Y:H.110
- pi-Stacking: Y:H.110
CLA.181: 8 residues within 4Å:- Chain 5: F.42, I.45
- Chain Z: W.184, G.185, A.186, F.189
- Ligands: CLA.182, RRX.242
6 PLIP interactions:4 interactions with chain Z, 2 interactions with chain 5,- Hydrophobic interactions: Z:A.186, Z:F.189, Z:F.189, Z:F.189, 5:F.42, 5:I.45
CLA.182: 27 residues within 4Å:- Chain 2: V.150, L.154, I.155
- Chain 5: F.39, F.42, I.46, L.47, Y.50
- Chain Z: S.183, G.188, F.189, P.191, G.196, A.199, H.200, A.203, A.204, L.207, W.246, F.249, V.250
- Ligands: CLA.181, CLA.183, CLA.185, CLA.188, CLA.189, LMG.243
23 PLIP interactions:14 interactions with chain Z, 5 interactions with chain 5, 4 interactions with chain 2,- Hydrophobic interactions: Z:F.189, Z:P.191, Z:A.199, Z:A.204, Z:L.207, Z:W.246, Z:W.246, Z:W.246, Z:F.249, Z:F.249, Z:F.249, 5:F.39, 5:F.42, 5:I.46, 5:L.47, 5:Y.50, 2:V.150, 2:L.154, 2:L.154, 2:I.155
- Salt bridges: Z:H.200
- pi-Stacking: Z:F.189
- pi-Cation interactions: Z:H.200
CLA.183: 24 residues within 4Å:- Chain 5: F.39, L.43
- Chain Z: R.67, L.68, A.145, L.148, C.149, F.152, V.197, H.200, H.201, A.204, W.246, A.247, V.250, V.251, A.261
- Ligands: CLA.182, CLA.184, CLA.185, CLA.186, CLA.189, CLA.190, RRX.242
14 PLIP interactions:3 interactions with chain 5, 11 interactions with chain Z,- Hydrophobic interactions: 5:F.39, 5:F.39, 5:L.43, Z:A.145, Z:L.148, Z:L.148, Z:F.152, Z:A.204, Z:W.246, Z:A.247, Z:V.250
- Salt bridges: Z:R.67, Z:H.201
- pi-Stacking: Z:H.201
CLA.184: 23 residues within 4Å:- Chain Z: W.32, F.60, F.64, R.67, L.148, V.244, A.247, A.248, V.251, F.450, H.454, F.457, F.461
- Ligands: CLA.183, CLA.185, CLA.187, CLA.190, CLA.191, CLA.192, CLA.193, CLA.195, BCR.198, DGD.202
10 PLIP interactions:10 interactions with chain Z,- Hydrophobic interactions: Z:W.32, Z:F.60, Z:V.244, Z:A.247, Z:A.248, Z:F.457, Z:F.457, Z:F.457, Z:F.461
- Salt bridges: Z:R.67
CLA.185: 23 residues within 4Å:- Chain Z: T.26, V.29, W.32, A.33, T.37, V.61, F.64, L.65, R.67, L.68, H.99, L.142, G.208
- Ligands: CLA.182, CLA.183, CLA.184, CLA.186, CLA.189, CLA.190, CLA.192, CLA.195, C7Z.199, DGD.202
9 PLIP interactions:9 interactions with chain Z,- Hydrophobic interactions: Z:V.29, Z:W.32, Z:A.33, Z:L.65, Z:L.68, Z:L.142
- Salt bridges: Z:R.67, Z:H.99
- pi-Stacking: Z:H.99
CLA.186: 18 residues within 4Å:- Chain Z: L.68, V.70, W.90, S.98, H.99, V.101, L.105, G.151, F.152, F.155, H.156, F.161, P.163
- Ligands: 4RF.79, CLA.183, CLA.185, C7Z.199, DGD.202
8 PLIP interactions:8 interactions with chain Z,- Hydrophobic interactions: Z:L.68, Z:L.68, Z:V.70, Z:W.90, Z:W.90, Z:V.101, Z:F.155
- pi-Stacking: Z:H.156
CLA.187: 27 residues within 4Å:- Chain 9: F.32, I.36
- Chain Z: W.32, M.36, F.39, E.40, Q.57, G.58, M.59, F.60, L.323, F.324, T.326, G.327, P.446, W.449, F.450, H.454
- Ligands: CLA.184, CLA.193, BCR.197, BCR.198, LMG.201, 3PH.203
- Chain a: A.8, T.9, F.12
17 PLIP interactions:5 interactions with chain a, 9 interactions with chain Z, 3 interactions with chain 9,- Hydrophobic interactions: a:A.8, a:F.12, a:F.12, a:F.12, a:F.12, Z:W.32, Z:F.39, Z:F.60, Z:F.60, Z:F.324, Z:P.446, Z:W.449, 9:F.32, 9:F.32, 9:F.32
- pi-Stacking: Z:F.60, Z:F.60
CLA.188: 25 residues within 4Å:- Chain 2: L.32, L.112, F.116, I.119, M.122, L.123, F.126, I.146
- Chain 5: L.44
- Chain Z: L.228, S.238, A.242, F.245, W.246, F.462, H.465, G.469, T.472, I.473
- Ligands: CLA.182, CLA.189, CLA.190, DGA.204, CLA.234, LMG.243
22 PLIP interactions:11 interactions with chain Z, 10 interactions with chain 2, 1 interactions with chain 5,- Hydrophobic interactions: Z:L.228, Z:A.242, Z:F.245, Z:W.246, Z:F.462, Z:F.462, Z:I.473, 2:L.32, 2:L.112, 2:F.116, 2:F.116, 2:I.119, 2:M.122, 2:L.123, 2:L.123, 2:F.126, 2:I.146, 5:L.44
- Hydrogen bonds: Z:S.238
- Salt bridges: Z:H.465
- pi-Stacking: Z:H.465
- pi-Cation interactions: Z:H.465
CLA.189: 19 residues within 4Å:- Chain 5: T.28, M.32, L.43, L.47
- Chain Z: F.138, L.207, A.211, F.214, H.215, V.218, L.228, W.246
- Ligands: CLA.182, CLA.183, CLA.185, CLA.188, CLA.190, DGA.204, RRX.242
12 PLIP interactions:3 interactions with chain 5, 9 interactions with chain Z,- Hydrophobic interactions: 5:T.28, 5:L.43, 5:L.47, Z:F.138, Z:F.138, Z:L.207, Z:A.211, Z:F.214, Z:W.246, Z:W.246
- Salt bridges: Z:H.215
- pi-Stacking: Z:H.215
CLA.190: 22 residues within 4Å:- Chain Z: L.18, H.22, L.134, P.135, I.137, F.138, H.141, L.142, A.145, M.230, V.236, S.239, S.240, A.243
- Ligands: CLA.183, CLA.184, CLA.185, CLA.188, CLA.189, CLA.192, CLA.195, RRX.242
8 PLIP interactions:8 interactions with chain Z,- Hydrophobic interactions: Z:L.18, Z:L.134, Z:I.137, Z:F.138, Z:V.236, Z:A.243
- Hydrogen bonds: Z:H.141
- Salt bridges: Z:H.141
CLA.191: 23 residues within 4Å:- Chain Z: W.4, Y.5, R.6, V.7, H.8, T.9, L.237, I.241, F.457, L.460, F.461, F.463, G.464, W.467, H.468, R.471
- Ligands: CLA.184, CLA.192, CLA.193, CLA.194, BCR.198, LHG.237, LHG.247
16 PLIP interactions:16 interactions with chain Z,- Hydrophobic interactions: Z:W.4, Z:W.4, Z:V.7, Z:T.9, Z:L.237, Z:I.241, Z:F.457, Z:F.461, Z:F.463
- Hydrogen bonds: Z:H.8
- Salt bridges: Z:H.8, Z:R.471
- pi-Stacking: Z:W.467, Z:W.467, Z:H.468, Z:H.468
CLA.192: 22 residues within 4Å:- Chain Z: H.8, V.11, I.12, L.18, V.21, H.22, H.25, T.26, I.233, E.234, V.236, L.237, S.240, I.241, V.244
- Ligands: CLA.184, CLA.185, CLA.190, CLA.191, CLA.193, CLA.194, CLA.195
16 PLIP interactions:16 interactions with chain Z,- Hydrophobic interactions: Z:H.8, Z:V.21, Z:V.21, Z:H.22, Z:T.26, Z:I.233, Z:I.233, Z:E.234, Z:V.236, Z:L.237, Z:L.237, Z:V.244
- Hydrogen bonds: Z:S.240
- Salt bridges: Z:H.22
- pi-Stacking: Z:H.25
- pi-Cation interactions: Z:H.22
CLA.193: 17 residues within 4Å:- Chain 9: I.25
- Chain Z: H.8, H.25, V.29, W.32, V.244, L.460, F.461
- Ligands: CLA.184, CLA.187, CLA.191, CLA.192, CLA.194, BCR.197, BCR.198, LHG.237
- Chain a: F.12
11 PLIP interactions:1 interactions with chain a, 9 interactions with chain Z, 1 interactions with chain 9,- Hydrophobic interactions: a:F.12, Z:V.29, Z:V.29, Z:W.32, Z:W.32, Z:V.244, Z:L.460, Z:F.461, 9:I.25
- Salt bridges: Z:H.8
- pi-Stacking: Z:H.25
CLA.194: 19 residues within 4Å:- Chain 9: Q.9, V.11
- Chain Z: V.7, H.8, V.10, V.11, V.21, M.24, L.28, W.114
- Ligands: CLA.191, CLA.192, CLA.193, BCR.197, SQD.200, LHG.247, SQD.248
- Chain a: L.11, F.19
8 PLIP interactions:7 interactions with chain Z, 1 interactions with chain a,- Hydrophobic interactions: Z:V.7, Z:V.11, Z:V.21, Z:V.21, Z:L.28, Z:W.114, a:F.19
- pi-Stacking: Z:H.8
CLA.195: 16 residues within 4Å:- Chain 5: L.12, L.15
- Chain Z: L.18, I.19, H.22, L.23, T.26, I.137, H.141, L.144
- Ligands: CLA.184, CLA.185, CLA.190, CLA.192, CLA.196, C7Z.199
9 PLIP interactions:3 interactions with chain 5, 6 interactions with chain Z,- Hydrophobic interactions: 5:L.12, 5:L.15, 5:L.15, Z:L.18, Z:I.19, Z:I.137, Z:I.137, Z:L.144
- pi-Stacking: Z:H.141
CLA.196: 11 residues within 4Å:- Chain 5: T.6, L.8
- Chain Z: I.19, L.23, A.109, W.112, H.113, L.119, L.121
- Ligands: CLA.195, C7Z.199
10 PLIP interactions:8 interactions with chain Z, 2 interactions with chain 5,- Hydrophobic interactions: Z:I.19, Z:L.23, Z:A.109, Z:W.112, Z:W.112, Z:L.119, Z:L.121, 5:T.6, 5:L.8
- pi-Stacking: Z:H.113
CLA.206: 21 residues within 4Å:- Chain 1: L.144, G.147, A.148, L.151, W.199, I.200, I.209, H.213, I.216, A.254, M.258, T.261, A.262, F.265, A.272, Y.273
- Ligands: CLA.207, CLA.208, CLA.211, CLA.212, BCR.220
13 PLIP interactions:13 interactions with chain 1,- Hydrophobic interactions: 1:L.144, 1:L.151, 1:W.199, 1:I.200, 1:I.216, 1:I.216, 1:A.254, 1:T.261, 1:F.265, 1:A.272
- Hydrogen bonds: 1:Y.273
- Salt bridges: 1:H.213
- pi-Stacking: 1:H.213
CLA.207: 23 residues within 4Å:- Chain 1: W.39, M.43, H.67, L.71, Y.73, L.150, L.151, K.154, F.158, V.255, G.259, A.262, Y.273, L.402, H.406, L.409, F.413
- Ligands: CLA.206, CLA.208, CLA.209, CLA.214, CLA.215, LMG.226
8 PLIP interactions:8 interactions with chain 1,- Hydrophobic interactions: 1:V.255, 1:L.409, 1:L.409, 1:L.409, 1:F.413
- Salt bridges: 1:H.67, 1:H.406
- pi-Stacking: 1:H.406
CLA.208: 15 residues within 4Å:- Chain 1: I.36, A.40, N.44, L.64, L.71, S.90, H.94, M.258
- Ligands: CLA.206, CLA.207, CLA.214, CLA.215, CLA.217, CLA.218, LMK.231
8 PLIP interactions:8 interactions with chain 1,- Hydrophobic interactions: 1:I.36, 1:A.40, 1:L.64, 1:L.71
- Hydrogen bonds: 1:S.90
- Salt bridges: 1:H.94
- pi-Stacking: 1:H.94
- pi-Cation interactions: 1:H.94
CLA.209: 17 residues within 4Å:- Chain 1: W.39, F.46, G.61, I.63, L.380, W.401, L.402, S.405
- Chain 8: P.17
- Chain Y: F.189
- Ligands: SQD.178, CLA.207, CLA.213, CLA.215, DGD.224, DGD.225, LMG.226
11 PLIP interactions:8 interactions with chain 1, 1 interactions with chain Y, 2 interactions with chain 8,- Hydrophobic interactions: 1:F.46, 1:I.63, 1:W.401, 1:W.401, 1:W.401, 1:L.402, Y:F.189, 8:P.17, 8:P.17
- pi-Stacking: 1:W.39, 1:W.401
CLA.210: 21 residues within 4Å:- Chain 1: Y.250, L.257, F.414, H.417, L.418, A.421, R.425
- Chain 6: F.23
- Chain Y: F.25, C.109, F.112, L.113, C.116, C.117, M.119, W.123
- Ligands: CLA.176, LMG.179, CLA.212, BCR.220, DGD.223
16 PLIP interactions:5 interactions with chain Y, 10 interactions with chain 1, 1 interactions with chain 6,- Hydrophobic interactions: Y:F.25, Y:F.112, Y:W.123, Y:W.123, 1:Y.250, 1:L.257, 1:F.414, 1:F.414, 1:L.418, 6:F.23
- pi-Stacking: Y:W.123, 1:H.417, 1:H.417
- Hydrogen bonds: 1:Y.250, 1:R.425
- Salt bridges: 1:R.425
CLA.211: 18 residues within 4Å:- Chain 1: L.137, L.141, L.219, C.220, G.223, W.226, H.227, T.231, P.232, W.233, W.235, F.240
- Ligands: CLA.176, CLA.206, CLA.212, BCR.220, LMG.227, DGA.228
6 PLIP interactions:6 interactions with chain 1,- Hydrophobic interactions: 1:L.137, 1:L.141, 1:W.226, 1:F.240
- Hydrogen bonds: 1:W.233
- pi-Stacking: 1:W.226
CLA.212: 20 residues within 4Å:- Chain 1: M.133, T.134, L.137, H.140, L.141, L.144, I.216, C.220, F.240, W.242, Y.247, Y.250, S.251, A.254, M.258
- Ligands: CLA.206, CLA.210, CLA.211, CLA.214, BCR.220
13 PLIP interactions:13 interactions with chain 1,- Hydrophobic interactions: 1:T.134, 1:L.137, 1:L.137, 1:L.144, 1:I.216, 1:F.240, 1:F.240, 1:W.242, 1:Y.247, 1:Y.247, 1:Y.250, 1:A.254
- Salt bridges: 1:H.140
CLA.213: 22 residues within 4Å:- Chain 1: W.12, A.13, G.14, N.15, A.16, L.248, L.252, C.408, L.409, F.412, F.413, V.415, G.416, W.419, H.420
- Ligands: SQD.178, CLA.209, CLA.214, CLA.215, CLA.216, LMG.226, LHG.239
14 PLIP interactions:14 interactions with chain 1,- Hydrophobic interactions: 1:A.16, 1:L.248, 1:L.248, 1:L.252, 1:L.252, 1:L.409, 1:F.412, 1:F.413, 1:V.415, 1:W.419
- Hydrogen bonds: 1:G.14, 1:N.15
- pi-Stacking: 1:W.419, 1:H.420
CLA.214: 21 residues within 4Å:- Chain 1: N.15, I.19, L.25, A.28, H.29, H.32, Y.125, H.140, L.144, G.244, E.245, Y.247, L.248, S.251
- Ligands: CLA.207, CLA.208, CLA.212, CLA.213, CLA.215, CLA.216, CLA.217
11 PLIP interactions:11 interactions with chain 1,- Hydrophobic interactions: 1:N.15, 1:I.19, 1:L.25, 1:A.28, 1:H.32, 1:L.144, 1:Y.247, 1:L.248
- Hydrogen bonds: 1:S.251
- pi-Cation interactions: 1:H.29, 1:H.29
CLA.215: 17 residues within 4Å:- Chain 1: N.15, H.32, L.35, I.36, W.39, L.409, F.412, F.413
- Chain 8: P.20, I.24
- Ligands: CLA.207, CLA.208, CLA.209, CLA.213, CLA.214, LMG.226, LHG.239
11 PLIP interactions:9 interactions with chain 1, 2 interactions with chain 8,- Hydrophobic interactions: 1:L.35, 1:I.36, 1:W.39, 1:L.409, 1:F.412, 1:F.413, 8:P.20, 8:I.24
- Hydrogen bonds: 1:N.15
- pi-Stacking: 1:H.32
- Metal complexes: 1:H.32
CLA.216: 26 residues within 4Å:- Chain 0: L.32
- Chain 1: G.1, R.2, W.11, G.14, R.17, L.18, K.24, A.28, A.99, F.103, V.106, S.109, L.110
- Chain 8: F.23, L.26, W.30, Q.31, R.37
- Ligands: CLA.213, CLA.214, BCR.221, BCR.222
- Chain g: V.20, V.23, P.24
20 PLIP interactions:1 interactions with chain 0, 8 interactions with chain 8, 3 interactions with chain g, 8 interactions with chain 1,- Hydrophobic interactions: 0:L.32, 8:F.23, 8:L.26, 8:W.30, 8:W.30, 8:W.30, g:V.20, g:V.23, g:P.24, 1:W.11, 1:L.18, 1:F.103, 1:V.106, 1:V.106
- Hydrogen bonds: 8:R.37, 1:R.2, 1:R.17
- pi-Stacking: 8:W.30, 8:W.30
- Salt bridges: 1:K.24
CLA.217: 20 residues within 4Å:- Chain 1: L.26, H.29, V.30, A.33, F.122, F.123, I.136, Y.139, H.140, I.142, I.143, C.146, G.147, L.150
- Ligands: CLA.208, CLA.214, CLA.218, BCR.219, LHG.229, SQD.230
12 PLIP interactions:12 interactions with chain 1,- Hydrophobic interactions: 1:L.26, 1:F.123, 1:I.136, 1:I.136, 1:I.136, 1:Y.139, 1:Y.139, 1:Y.139, 1:I.143
- Hydrogen bonds: 1:H.29
- pi-Stacking: 1:H.140, 1:H.140
CLA.218: 15 residues within 4Å:- Chain 1: L.26, V.30, V.100, L.101, F.103, G.104, Y.107, H.108, L.116, Y.120, F.123
- Ligands: CLA.208, CLA.217, BCR.219, LHG.229
16 PLIP interactions:16 interactions with chain 1,- Hydrophobic interactions: 1:L.26, 1:L.26, 1:V.30, 1:L.101, 1:F.103, 1:Y.107, 1:L.116, 1:Y.120, 1:Y.120, 1:F.123, 1:F.123
- Hydrogen bonds: 1:Y.107
- Salt bridges: 1:H.108
- pi-Stacking: 1:H.108, 1:Y.120, 1:F.123
CLA.233: 26 residues within 4Å:- Chain 2: W.44, L.118, F.142, P.145, V.148, S.151, V.152, F.177, I.178, F.181, Q.182, W.187, T.188, H.193, V.197, V.200, L.275, S.278, A.279, V.282
- Chain Y: M.175, F.198
- Ligands: CLA.171, CLA.172, CLA.173, PHO.175
15 PLIP interactions:15 interactions with chain 2,- Hydrophobic interactions: 2:L.118, 2:L.118, 2:F.142, 2:P.145, 2:F.177, 2:I.178, 2:I.178, 2:F.181, 2:Q.182, 2:V.197, 2:V.200, 2:V.200, 2:L.275, 2:L.275
- pi-Stacking: 2:W.187
CLA.234: 20 residues within 4Å:- Chain 2: L.31, P.35, F.39, L.85, F.87, V.88, W.89, F.109, L.112, H.113, F.116
- Chain 5: L.37
- Ligands: CLA.188, DGA.204
- Chain f: L.13, V.14, G.16, A.17, V.19, I.23
20 PLIP interactions:16 interactions with chain 2, 3 interactions with chain f, 1 interactions with chain 5,- Hydrophobic interactions: 2:P.35, 2:F.39, 2:F.39, 2:F.87, 2:V.88, 2:W.89, 2:W.89, 2:W.89, 2:F.109, 2:L.112, 2:F.116, f:L.13, f:V.14, f:I.23, 5:L.37
- Hydrogen bonds: 2:V.88
- pi-Stacking: 2:F.39, 2:F.109, 2:H.113, 2:H.113
- 4 x PHO: PHEOPHYTIN A(Non-covalent)
PHO.8: 28 residues within 4Å:- Chain A: L.33, A.36, I.37, Y.40, V.107, F.111, Y.118, E.122, A.138, Y.139, A.141, P.142, F.150, M.164, L.166, G.167, P.271, V.272, I.275
- Chain E: L.201, L.205, I.209, W.249, F.253
- Ligands: CLA.5, CLA.6, PL9.70, LHG.72
16 PLIP interactions:14 interactions with chain A, 2 interactions with chain E- Hydrophobic interactions: A:L.33, A:A.36, A:I.37, A:Y.40, A:Y.40, A:V.107, A:F.111, A:Y.118, A:A.141, A:P.142, A:F.150, A:V.272, E:L.201, E:F.253
- Hydrogen bonds: A:Y.118, A:E.122
PHO.9: 28 residues within 4Å:- Chain A: F.198, L.202, M.206, F.247, L.250, I.251
- Chain E: A.37, A.40, V.41, W.44, V.110, G.114, G.117, L.118, F.121, Q.125, N.138, A.141, F.142, A.144, P.145, F.149, F.169, G.170, V.171, L.275
- Ligands: CLA.7, CLA.67
21 PLIP interactions:19 interactions with chain E, 2 interactions with chain A- Hydrophobic interactions: E:A.37, E:A.40, E:V.41, E:W.44, E:W.44, E:W.44, E:W.44, E:V.110, E:L.118, E:A.141, E:F.142, E:F.142, E:A.144, E:F.169, E:F.169, E:L.275, E:L.275, A:F.198, A:L.202
- Hydrogen bonds: E:Q.125, E:N.138
PHO.174: 26 residues within 4Å:- Chain 2: L.201, L.205, I.209, W.249, F.253
- Chain Y: L.33, A.36, I.37, Y.40, F.111, Y.118, E.122, A.138, Y.139, A.141, P.142, F.150, L.166, G.167, P.271, V.272, I.275
- Ligands: CLA.171, CLA.172, PL9.236, LHG.238
18 PLIP interactions:3 interactions with chain 2, 15 interactions with chain Y- Hydrophobic interactions: 2:L.201, 2:L.205, 2:F.253, Y:L.33, Y:A.36, Y:Y.40, Y:F.111, Y:F.111, Y:F.111, Y:Y.118, Y:A.138, Y:Y.139, Y:Y.139, Y:A.141, Y:P.142, Y:F.150, Y:L.166, Y:I.275
PHO.175: 28 residues within 4Å:- Chain 2: A.37, A.40, W.44, V.110, G.114, G.117, L.118, F.121, Q.125, N.138, A.141, F.142, P.145, F.149, F.169, G.170, V.171, I.174, P.271, L.275
- Chain Y: F.198, S.201, L.202, A.205, M.206, L.250
- Ligands: CLA.173, CLA.233
24 PLIP interactions:20 interactions with chain 2, 4 interactions with chain Y- Hydrophobic interactions: 2:A.37, 2:A.40, 2:W.44, 2:W.44, 2:W.44, 2:W.44, 2:V.110, 2:A.141, 2:F.142, 2:F.142, 2:P.145, 2:F.149, 2:F.169, 2:F.169, 2:V.171, 2:I.174, 2:P.271, 2:L.275, Y:F.198, Y:F.198, Y:L.202, Y:A.205
- Hydrogen bonds: 2:Q.125, 2:N.138
- 16 x BCR: BETA-CAROTENE(Non-covalent)
BCR.11: 18 residues within 4Å:- Chain A: W.12, I.13, I.22, I.30, P.31, L.34, T.35, I.42, A.43, A.46, P.48, L.94, L.98
- Chain I: F.15, L.18
- Ligands: CLA.10, SPH.14, SQD.205
Ligand excluded by PLIPBCR.31: 15 residues within 4Å:- Chain B: S.20, M.24, L.28, S.110, V.111, W.114
- Chain M: A.8, L.11
- Ligands: CLA.21, CLA.27, CLA.28, BCR.32, SQD.34, LMG.35, 3PH.37
Ligand excluded by PLIPBCR.32: 17 residues within 4Å:- Chain B: L.28, G.31, W.32, A.35, I.100, V.101, S.103, G.104, L.108
- Ligands: CLA.21, CLA.25, CLA.27, BCR.31, LMG.35, 3PH.37, SQD.39, 3PH.249
Ligand excluded by PLIPBCR.53: 18 residues within 4Å:- Chain D: F.88, V.92, L.93, I.96, S.97, V.100, L.101, F.123
- Chain K: Y.6
- Chain S: V.51, F.52, V.54, G.55
- Chain V: L.231
- Ligands: CLA.51, CLA.52, LHG.63, LMK.65
Ligand excluded by PLIPBCR.54: 17 residues within 4Å:- Chain D: I.185, I.189, I.200, V.203, D.208, I.209, G.212, H.213, I.216, F.240
- Chain I: I.20, F.23, L.24
- Ligands: CLA.40, CLA.44, CLA.45, CLA.46
Ligand excluded by PLIPBCR.55: 24 residues within 4Å:- Chain C: V.14, V.15, G.18, P.19
- Chain D: F.38
- Chain J: G.10, T.11, G.14, L.15
- Chain K: I.12, L.16, I.19, L.22, F.23, L.25, L.26, F.28, V.29
- Chain S: S.16, F.17, V.20
- Ligands: CLA.50, BCR.56, 4RF.81
Ligand excluded by PLIPBCR.56: 24 residues within 4Å:- Chain D: A.31, G.34, L.35, F.38, V.92, S.98, A.99, G.102, V.106, S.109
- Chain K: F.9, I.12, V.13, F.23, L.26, A.27, W.30
- Chain S: L.9, L.12, V.13, S.16, V.20
- Ligands: CLA.50, BCR.55
Ligand excluded by PLIPBCR.69: 14 residues within 4Å:- Chain E: Y.38, F.39, G.42, G.43, L.45, F.109
- Chain G: P.15, T.16, F.19, L.20, I.23
- Chain J: A.17, L.21
- Ligands: LMG.74
Ligand excluded by PLIPBCR.177: 15 residues within 4Å:- Chain Y: W.12, V.27, I.30, P.31, T.35, V.39, I.42, A.43, A.46, L.94, W.97, L.98
- Ligands: SQD.39, CLA.176, SPH.180
Ligand excluded by PLIPBCR.197: 15 residues within 4Å:- Chain Z: M.24, L.28, V.111, W.114
- Ligands: CLA.187, CLA.193, CLA.194, BCR.198, SQD.200, LMG.201, 3PH.203, LHG.247
- Chain a: T.7, A.8, L.11
Ligand excluded by PLIPBCR.198: 17 residues within 4Å:- Chain Z: L.28, G.31, W.32, A.35, I.100, V.101, S.103, G.104
- Ligands: CLA.184, CLA.187, CLA.191, CLA.193, BCR.197, LMG.201, 3PH.203, SQD.205, LHG.247
Ligand excluded by PLIPBCR.219: 12 residues within 4Å:- Chain 1: V.92, L.93, I.96, S.97, V.100, F.123
- Chain 8: Y.6
- Ligands: CLA.217, CLA.218, LHG.229, LMK.231
- Chain g: G.55
Ligand excluded by PLIPBCR.220: 17 residues within 4Å:- Chain 1: I.185, F.186, I.189, D.208, I.209, G.212, H.213, I.216, F.240
- Chain 6: I.20, F.23, L.24
- Ligands: LMG.179, CLA.206, CLA.210, CLA.211, CLA.212
Ligand excluded by PLIPBCR.221: 22 residues within 4Å:- Chain 0: V.14, V.15, G.18, P.19
- Chain 1: F.38
- Chain 7: G.10, G.14, L.15, I.18
- Chain 8: L.16, I.19, L.22, F.23, L.25, L.26, F.28, V.29
- Ligands: CLA.216, BCR.222, 4RF.246
- Chain g: F.17, V.20
Ligand excluded by PLIPBCR.222: 22 residues within 4Å:- Chain 1: A.31, G.34, L.35, F.38, L.45, V.92, L.95, S.98, A.99, G.102, V.106, S.109, L.110
- Chain 8: Y.6, F.9, F.23
- Ligands: CLA.216, BCR.221
- Chain g: L.9, L.12, V.13, S.16
Ligand excluded by PLIPBCR.235: 12 residues within 4Å:- Chain 2: Y.38, F.39, G.42, G.43, L.45, T.46
- Chain 4: P.15, T.16, F.19
- Chain 7: A.17, L.21
- Ligands: LMG.240
Ligand excluded by PLIP- 10 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
SQD.12: 23 residues within 4Å:- Chain A: F.257, N.258, N.259, S.262, F.265, F.266, V.269, W.270, V.273
- Chain D: Q.4, A.10, W.12
- Chain E: N.226, F.228, R.229
- Chain K: V.21, L.25, F.28
- Ligands: CLA.43, CLA.47, DGD.58, LHG.73, 4RF.81
14 PLIP interactions:3 interactions with chain D, 8 interactions with chain A, 2 interactions with chain K, 1 interactions with chain E- Hydrophobic interactions: D:W.12, D:W.12, A:F.257, A:F.266, A:F.266, A:V.269, A:W.270, K:V.21, K:L.25
- Hydrogen bonds: D:Q.4, A:N.258, A:N.259, A:S.262, E:N.226
SQD.34: 9 residues within 4Å:- Chain 9: R.15, Y.19
- Chain B: W.114
- Chain L: K.8
- Ligands: CLA.28, BCR.31, SQD.83
- Chain d: F.19, F.23
7 PLIP interactions:3 interactions with chain L, 4 interactions with chain d- Hydrogen bonds: L:K.8, L:K.8
- Salt bridges: L:K.8
- Hydrophobic interactions: d:F.19, d:F.19, d:F.23, d:F.23
SQD.39: 10 residues within 4Å:- Chain B: W.74, G.88
- Chain Y: L.34, S.38, I.42, D.95
- Ligands: BCR.32, BCR.177, SPH.180, 4RF.244
5 PLIP interactions:3 interactions with chain B, 2 interactions with chain Y- Hydrophobic interactions: B:W.74, B:W.74, Y:L.34
- Hydrogen bonds: B:W.74, Y:D.95
SQD.64: 14 residues within 4Å:- Chain D: F.122, N.131, N.135, Y.139, C.146, W.149, I.221, I.228, Y.229
- Ligands: CLA.51, CLA.52, LHG.63, CLA.137, LPX.143
5 PLIP interactions:5 interactions with chain D- Hydrophobic interactions: D:W.149, D:I.221
- Hydrogen bonds: D:N.131, D:N.135, D:Y.229
SQD.83: 7 residues within 4Å:- Chain L: K.8, Q.9
- Chain M: I.15, F.19, L.23
- Ligands: CLA.28, SQD.34
5 PLIP interactions:4 interactions with chain M, 1 interactions with chain L- Hydrophobic interactions: M:I.15, M:F.19, M:F.19
- Salt bridges: M:K.26
- Hydrogen bonds: L:Q.9
SQD.178: 19 residues within 4Å:- Chain 1: W.11, W.12
- Chain 2: N.226, F.228, R.229
- Chain 8: I.24, F.28
- Chain Y: F.257, S.262, F.265, F.266, V.269, V.273, L.277
- Ligands: CLA.209, CLA.213, DGD.224, LMG.226, 4RF.246
11 PLIP interactions:6 interactions with chain Y, 1 interactions with chain 2, 2 interactions with chain 1, 2 interactions with chain 8- Hydrophobic interactions: Y:F.257, Y:F.265, Y:F.266, Y:V.269, Y:L.277, 1:W.11, 1:W.11, 8:I.24, 8:F.28
- Hydrogen bonds: Y:S.262, 2:N.226
SQD.200: 10 residues within 4Å:- Chain 9: K.8
- Chain P: G.15, F.18, F.19, F.23
- Chain Z: W.114, V.115
- Ligands: CLA.194, BCR.197, SQD.248
9 PLIP interactions:7 interactions with chain P, 2 interactions with chain 9- Hydrophobic interactions: P:F.18, P:F.19, P:F.19, P:F.19, P:F.23, P:F.23, P:F.23
- Hydrogen bonds: 9:K.8
- Salt bridges: 9:K.8
SQD.205: 11 residues within 4Å:- Chain A: S.38, I.42, D.95
- Chain N: K.110
- Chain Z: W.74, E.93, V.101
- Ligands: BCR.11, SPH.14, 4RF.79, BCR.198
6 PLIP interactions:3 interactions with chain Z, 2 interactions with chain A, 1 interactions with chain N- Hydrophobic interactions: Z:W.74, Z:W.74, Z:V.101, A:I.42
- Hydrogen bonds: A:D.95, N:K.110
SQD.230: 12 residues within 4Å:- Chain 1: Y.139, I.142, C.146, W.149, L.150, L.153, I.221, I.225, I.228, Y.229
- Ligands: CLA.217, LHG.229
11 PLIP interactions:11 interactions with chain 1- Hydrophobic interactions: 1:I.142, 1:W.149, 1:W.149, 1:L.150, 1:L.153, 1:I.221, 1:I.228
- Hydrogen bonds: 1:Y.139, 1:Y.139, 1:I.228, 1:Y.229
SQD.248: 9 residues within 4Å:- Chain 9: K.8, Q.9
- Chain L: R.15
- Ligands: CLA.194, SQD.200
- Chain a: S.18, F.19, I.22, K.26
5 PLIP interactions:3 interactions with chain a, 1 interactions with chain 9, 1 interactions with chain L- Hydrophobic interactions: a:F.19, a:F.19
- Salt bridges: a:K.26, L:R.15
- Hydrogen bonds: 9:Q.9
- 14 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.13: 25 residues within 4Å:- Chain A: F.85, P.87, W.89, E.90
- Chain D: I.189, V.190, K.191, S.192, F.194, D.197, W.199, L.257, F.260
- Chain I: K.5, Y.9, F.19
- Chain Q: G.8, G.10, L.13, F.15, G.16
- Ligands: CLA.10, CLA.44, CLA.45, DGD.57
12 PLIP interactions:4 interactions with chain I, 5 interactions with chain D, 2 interactions with chain Q, 1 interactions with chain A- Hydrophobic interactions: I:F.19, D:W.199, D:W.199, D:L.257, D:F.260
- Hydrogen bonds: I:K.5, I:K.5, I:Y.9, D:S.192, Q:G.10, Q:L.13, A:W.89
LMG.35: 17 residues within 4Å:- Chain B: T.326, G.327, A.328, S.331, G.453, S.456, F.457, L.460
- Chain E: L.280
- Chain L: I.36
- Chain M: V.1, L.4, A.8
- Ligands: CLA.21, BCR.31, BCR.32, 3PH.37
11 PLIP interactions:8 interactions with chain B, 1 interactions with chain L, 1 interactions with chain M, 1 interactions with chain E- Hydrophobic interactions: B:F.457, B:F.457, B:L.460, L:I.36, M:A.8, E:L.280
- Hydrogen bonds: B:T.326, B:T.326, B:A.328, B:S.331, B:S.331
LMG.60: 14 residues within 4Å:- Chain C: Q.7
- Chain D: F.46, H.50, Q.60, L.409
- Chain J: A.22
- Chain K: D.14, I.18, V.21
- Ligands: CLA.41, CLA.43, CLA.47, DGD.58, DGA.80
9 PLIP interactions:5 interactions with chain D, 1 interactions with chain C, 1 interactions with chain J, 2 interactions with chain K- Hydrophobic interactions: D:L.409, J:A.22, K:I.18, K:V.21
- Hydrogen bonds: D:H.50, D:Q.60, C:Q.7
- Salt bridges: D:H.50, D:H.50
LMG.61: 11 residues within 4Å:- Chain D: W.233, P.234, W.235
- Ligands: CLA.45, DGA.62, XAT.102, CLA.155, CLA.156, CLA.158, LHG.163, SPH.164
No protein-ligand interaction detected (PLIP)LMG.74: 18 residues within 4Å:- Chain E: Y.63, G.66, C.67, N.68, F.69
- Chain G: I.23, M.26, Q.27
- Chain J: L.21, F.24, F.25, G.27, S.28, L.32
- Ligands: CLA.7, DGD.59, CLA.67, BCR.69
13 PLIP interactions:5 interactions with chain J, 6 interactions with chain E, 2 interactions with chain G- Hydrophobic interactions: J:L.21, J:F.24, J:F.25, E:F.69, E:F.69, E:F.69, E:F.69
- Hydrogen bonds: J:F.24, J:G.27, E:Y.63, E:F.69, G:M.26, G:Q.27
LMG.77: 21 residues within 4Å:- Chain B: Y.192, F.249, G.253, W.256, Y.257, Y.272, Q.276, L.455, F.462
- Chain E: H.83, L.85, L.112, I.119, V.150, L.158, G.159
- Chain H: L.47, Y.50, N.51
- Ligands: CLA.16, CLA.22
17 PLIP interactions:7 interactions with chain B, 7 interactions with chain E, 3 interactions with chain H- Hydrophobic interactions: B:W.256, B:L.455, B:L.455, B:F.462, E:L.85, E:L.112, E:I.119, E:V.150, H:Y.50, H:Y.50
- Hydrogen bonds: B:Y.192, B:Y.192, B:Q.276, E:H.83, E:H.83, H:N.51
- Salt bridges: E:H.83
LMG.85: 13 residues within 4Å:- Chain Q: P.14, V.17, N.18, D.19, G.20, G.23, W.24, A.27, L.30
- Chain W: K.74, N.75
- Ligands: DGA.62, PTY.166
4 PLIP interactions:1 interactions with chain W, 3 interactions with chain Q- Hydrogen bonds: W:N.75, Q:N.18
- Hydrophobic interactions: Q:A.27, Q:L.30
LMG.179: 21 residues within 4Å:- Chain 1: V.190, K.191, S.192, P.193, D.197, W.199, L.257
- Chain 6: Y.9, V.16
- Chain Y: F.85, W.89, E.90
- Ligands: CLA.176, CLA.210, BCR.220, DGD.223
- Chain e: G.8, D.9, L.13, F.15, G.16
8 PLIP interactions:1 interactions with chain Y, 3 interactions with chain 1, 1 interactions with chain e, 3 interactions with chain 6- Hydrogen bonds: Y:W.89, 1:S.192, 1:D.197, e:D.9, 6:Y.9, 6:Y.9
- Hydrophobic interactions: 1:P.193, 6:V.16
LMG.201: 17 residues within 4Å:- Chain 2: L.280
- Chain 9: I.36
- Chain Z: T.326, G.327, A.328, S.331, R.443, G.453, S.456, F.457
- Ligands: CLA.187, BCR.197, BCR.198, 3PH.203
- Chain a: V.1, L.4, F.12
10 PLIP interactions:6 interactions with chain Z, 1 interactions with chain a, 2 interactions with chain 9, 1 interactions with chain 2- Hydrophobic interactions: Z:F.457, Z:F.457, a:F.12, 9:I.36, 9:I.36, 2:L.280
- Hydrogen bonds: Z:A.328, Z:S.331, Z:S.331, Z:R.443
LMG.226: 15 residues within 4Å:- Chain 1: F.46, H.50, Q.60, L.409
- Chain 8: D.14, I.18, V.21, L.22
- Ligands: SQD.178, CLA.207, CLA.209, CLA.213, CLA.215, DGD.224, DGA.245
5 PLIP interactions:3 interactions with chain 1, 2 interactions with chain 8- Hydrophobic interactions: 1:L.409, 8:V.21, 8:L.22
- Hydrogen bonds: 1:H.50
- Salt bridges: 1:H.50
LMG.227: 4 residues within 4Å:- Chain 1: W.233, W.235
- Ligands: CLA.211, DGA.228
No protein-ligand interaction detected (PLIP)LMG.240: 16 residues within 4Å:- Chain 2: Y.63, G.66, C.67, F.69
- Chain 4: I.23, M.26, Q.27
- Chain 7: F.24, F.25, G.27, S.28, L.32, G.33
- Ligands: CLA.173, DGD.225, BCR.235
10 PLIP interactions:4 interactions with chain 7, 4 interactions with chain 2, 2 interactions with chain 4- Hydrophobic interactions: 7:F.25, 2:F.69, 2:F.69
- Hydrogen bonds: 7:F.24, 7:G.27, 7:S.28, 2:Y.63, 2:F.69, 4:M.26, 4:Q.27
LMG.243: 25 residues within 4Å:- Chain 2: G.82, H.83, L.85, A.115, I.119, V.150, L.154, L.158, G.159, L.287
- Chain 3: R.63
- Chain 5: L.47, Y.50, N.51
- Chain Z: Y.192, F.249, G.253, W.256, Y.257, Y.272, T.451, L.455, F.462
- Ligands: CLA.182, CLA.188
22 PLIP interactions:9 interactions with chain 2, 3 interactions with chain 5, 8 interactions with chain Z, 2 interactions with chain 3- Hydrophobic interactions: 2:L.85, 2:A.115, 2:I.119, 2:V.150, 2:L.158, 2:L.158, 2:L.287, 5:L.47, 5:Y.50, Z:F.249, Z:W.256, Z:T.451, Z:L.455, Z:F.462, Z:F.462
- Hydrogen bonds: 2:H.83, 5:N.51, Z:Y.192, Z:Y.192, 3:R.63, 3:R.63
- Salt bridges: 2:H.83
LMG.250: 9 residues within 4Å:- Ligands: DGA.228
- Chain e: P.14, N.18, D.19, G.20, G.23, W.24, A.27, G.31
3 PLIP interactions:3 interactions with chain e- Hydrophobic interactions: e:P.14, e:A.27
- Hydrogen bonds: e:G.20
- 3 x SPH: SPHINGOSINE(Non-covalent)
SPH.14: 8 residues within 4Å:- Chain A: I.88, L.94
- Chain I: M.1, L.4
- Ligands: CLA.10, BCR.11, 4RF.79, SQD.205
4 PLIP interactions:2 interactions with chain I, 2 interactions with chain A- Hydrophobic interactions: I:L.4, I:L.4, A:I.88
- Hydrogen bonds: A:L.94
SPH.164: 11 residues within 4Å:- Chain D: L.222, I.225, W.226, Y.229, T.230
- Ligands: CLA.45, LMG.61, XAT.102, CLA.155, CLA.158, LHG.163
5 PLIP interactions:5 interactions with chain D- Hydrophobic interactions: D:L.222, D:L.222, D:I.225, D:W.226, D:Y.229
SPH.180: 6 residues within 4Å:- Chain 6: L.4
- Chain Y: L.94
- Ligands: SQD.39, CLA.176, BCR.177, 4RF.244
3 PLIP interactions:1 interactions with chain Y, 2 interactions with chain 6- Hydrophobic interactions: Y:L.94, 6:L.4, 6:L.4
- 2 x C7Z: (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol(Non-covalent)
C7Z.33: 14 residues within 4Å:- Chain B: L.102, L.105, L.106, L.108, A.109, V.111, W.112, V.115, Y.116
- Ligands: CLA.20, CLA.29, CLA.30, DGD.36, 3PH.249
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:L.102, B:L.105, B:L.106, B:L.108, B:V.111, B:V.115
C7Z.199: 14 residues within 4Å:- Chain Z: W.90, L.102, L.105, L.108, A.109, V.111, W.112, V.115
- Ligands: 3PH.84, CLA.185, CLA.186, CLA.195, CLA.196, DGD.202
7 PLIP interactions:7 interactions with chain Z- Hydrophobic interactions: Z:W.90, Z:L.105, Z:L.105, Z:L.108, Z:V.111, Z:W.112, Z:V.115
- 8 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.36: 7 residues within 4Å:- Chain B: I.89, W.90, F.161
- Ligands: CLA.18, CLA.19, CLA.20, C7Z.33
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:F.161
DGD.57: 27 residues within 4Å:- Chain A: L.83, V.143, A.144, T.147, I.152, I.155
- Chain D: P.193, F.194, G.195, G.196, G.198, W.199, V.201, S.202, V.203, F.260, C.264, F.268, N.269, N.270, T.271, D.336, F.337, R.338, F.414
- Ligands: LMG.13, CLA.44
17 PLIP interactions:15 interactions with chain D, 2 interactions with chain A- Hydrophobic interactions: D:P.193, D:P.193, D:F.194, D:W.199, D:V.201, D:F.260, D:F.260, D:F.414, D:F.414, A:V.143, A:I.155
- Hydrogen bonds: D:G.196, D:N.270, D:T.271, D:T.271, D:R.338, D:R.338
DGD.58: 20 residues within 4Å:- Chain A: H.187, F.189, T.284, L.289
- Chain D: E.59, Q.60, G.61, S.382, N.394, F.395, V.396, W.401, T.404, S.405
- Chain J: Y.29
- Ligands: SQD.12, CLA.43, DGD.59, LMG.60, DGA.80
8 PLIP interactions:3 interactions with chain A, 5 interactions with chain D- Hydrophobic interactions: A:F.189, A:T.284, A:L.289
- Hydrogen bonds: D:E.59, D:S.382, D:N.394, D:V.396, D:V.396
DGD.59: 27 residues within 4Å:- Chain A: P.188, M.191, F.192, A.195, F.292, N.293, F.294, S.297
- Chain D: L.380, N.381, S.382, V.383, N.391, A.392, N.394
- Chain E: N.68, L.70
- Chain J: F.25, S.28, Y.29, G.33, S.34, S.35
- Ligands: CLA.7, CLA.43, DGD.58, LMG.74
16 PLIP interactions:6 interactions with chain D, 7 interactions with chain A, 2 interactions with chain J, 1 interactions with chain E- Hydrophobic interactions: D:L.380, A:P.188, A:P.188, A:M.191, A:F.192, A:F.192, A:A.195, A:F.292, E:L.70
- Hydrogen bonds: D:N.381, D:N.391, D:N.391, D:V.393, D:N.394, J:S.28, J:G.33
DGD.202: 7 residues within 4Å:- Chain Z: W.90, V.160, F.161
- Ligands: CLA.184, CLA.185, CLA.186, C7Z.199
1 PLIP interactions:1 interactions with chain Z- Hydrogen bonds: Z:F.161
DGD.223: 26 residues within 4Å:- Chain 1: P.193, F.194, G.196, G.198, W.199, V.201, S.202, V.203, D.204, F.260, C.264, F.268, N.269, N.270, T.271, D.336, F.337, R.338
- Chain Y: L.83, F.112, V.143, T.147, I.152, I.155
- Ligands: LMG.179, CLA.210
19 PLIP interactions:3 interactions with chain Y, 16 interactions with chain 1- Hydrophobic interactions: Y:V.143, Y:I.152, Y:I.155, 1:P.193, 1:F.194, 1:F.194, 1:W.199, 1:V.201, 1:F.260
- Hydrogen bonds: 1:G.196, 1:N.270, 1:N.270, 1:T.271, 1:T.271, 1:T.271, 1:D.336, 1:D.336, 1:R.338, 1:R.338
DGD.224: 20 residues within 4Å:- Chain 1: E.59, Q.60, G.61, S.382, N.394, F.395, V.396, W.401, T.404, S.405
- Chain 7: F.25, Y.29
- Chain Y: F.189, T.284, L.289
- Ligands: SQD.178, CLA.209, DGD.225, LMG.226, DGA.245
9 PLIP interactions:2 interactions with chain Y, 5 interactions with chain 1, 2 interactions with chain 7- Hydrophobic interactions: Y:F.189, Y:T.284, 7:F.25, 7:F.25
- Hydrogen bonds: 1:E.59, 1:S.382, 1:N.394, 1:V.396, 1:V.396
DGD.225: 22 residues within 4Å:- Chain 1: L.380, N.381, V.383, N.391, A.392, N.394
- Chain 2: N.68
- Chain 7: F.25, S.28, Y.29, G.33, S.34, S.35
- Chain Y: P.188, M.191, F.192, F.292, F.294, S.297
- Ligands: CLA.209, DGD.224, LMG.240
17 PLIP interactions:5 interactions with chain 7, 3 interactions with chain 1, 8 interactions with chain Y, 1 interactions with chain 2- Hydrophobic interactions: 7:F.25, 1:L.380, Y:P.188, Y:M.191, Y:F.192, Y:F.192, Y:F.192, Y:F.192, Y:F.292
- Hydrogen bonds: 7:S.28, 7:Y.29, 7:G.33, 7:S.35, 1:N.381, 1:N.391, Y:S.297, 2:N.68
- 5 x 3PH: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE(Non-covalent)
3PH.37: 12 residues within 4Å:- Chain B: W.32, A.35, L.38, F.39, V.43
- Ligands: CLA.21, BCR.31, BCR.32, LMG.35, 3PH.249
- Chain d: L.4, I.11
8 PLIP interactions:2 interactions with chain d, 6 interactions with chain B- Hydrophobic interactions: d:L.4, d:I.11, B:L.38, B:L.38, B:F.39, B:F.39, B:F.39, B:V.43
3PH.84: 13 residues within 4Å:- Chain A: N.18, R.19, L.20, I.22, I.30, L.34
- Chain P: I.11, L.14, G.15, I.17, F.18, F.22
- Ligands: C7Z.199
9 PLIP interactions:5 interactions with chain P, 4 interactions with chain A- Hydrophobic interactions: P:I.11, P:L.14, P:I.17, P:F.18, P:F.22, A:I.22, A:I.30, A:L.34
- Hydrogen bonds: A:R.19
3PH.144: 8 residues within 4Å:- Chain V: N.81, Y.215, K.220, L.222, S.223
- Ligands: CHL.90, CHL.91, LPX.143
3 PLIP interactions:3 interactions with chain V- Hydrophobic interactions: V:L.222
- Hydrogen bonds: V:S.223
- Salt bridges: V:K.220
3PH.203: 9 residues within 4Å:- Chain Z: A.35, L.38, F.39, A.42, V.43
- Ligands: CLA.187, BCR.197, BCR.198, LMG.201
5 PLIP interactions:5 interactions with chain Z- Hydrophobic interactions: Z:L.38, Z:L.38, Z:F.39, Z:F.39, Z:V.43
3PH.249: 16 residues within 4Å:- Chain Y: N.18, R.19, L.20, I.30, L.34
- Ligands: BCR.32, C7Z.33, 3PH.37, CLA.172
- Chain d: F.8, I.11, L.14, I.17, F.18, I.21, F.22
11 PLIP interactions:8 interactions with chain d, 3 interactions with chain Y- Hydrophobic interactions: d:F.8, d:I.11, d:L.14, d:L.14, d:I.17, d:F.18, d:F.18, d:I.21, Y:I.30, Y:L.34
- Hydrogen bonds: Y:R.19
- 6 x DGA: DIACYL GLYCEROL(Non-covalent)
DGA.38: 15 residues within 4Å:- Chain B: G.227, L.228, I.473
- Chain E: L.32, L.123, F.126, E.127, R.130
- Chain H: I.36, L.37, A.40
- Chain R: L.20
- Ligands: CLA.22, CLA.23, CLA.68
9 PLIP interactions:2 interactions with chain B, 3 interactions with chain H, 3 interactions with chain E, 1 interactions with chain R- Hydrophobic interactions: B:L.228, B:I.473, H:I.36, H:L.37, H:A.40, E:L.32, E:F.126, E:E.127, R:L.20
DGA.62: 16 residues within 4Å:- Chain D: W.235
- Chain I: F.21
- Chain Q: F.15, I.26, G.28, G.31, T.32, W.34, Y.37, F.38
- Ligands: CLA.45, CLA.46, LMG.61, LMG.85, CLA.155, CLA.156
5 PLIP interactions:5 interactions with chain Q- Hydrophobic interactions: Q:F.15, Q:I.26, Q:W.34, Q:W.34, Q:W.34
DGA.80: 9 residues within 4Å:- Chain C: L.4
- Chain J: G.19, A.22, I.23, F.25, Y.26, Y.29
- Ligands: DGD.58, LMG.60
7 PLIP interactions:6 interactions with chain J, 1 interactions with chain C- Hydrophobic interactions: J:A.22, J:I.23, J:F.25, J:Y.26, J:Y.26, J:Y.26, C:L.4
DGA.204: 16 residues within 4Å:- Chain 2: W.28, L.31, L.32, L.123, F.126, E.127, R.130
- Chain 5: I.36, A.40
- Chain Z: G.227, L.228, I.473
- Ligands: CLA.188, CLA.189, CLA.234
- Chain f: L.20
8 PLIP interactions:1 interactions with chain Z, 2 interactions with chain 5, 4 interactions with chain 2, 1 interactions with chain f- Hydrophobic interactions: Z:L.228, 5:I.36, 5:A.40, 2:W.28, 2:L.123, 2:L.123, 2:F.126, f:L.20
DGA.228: 13 residues within 4Å:- Chain 1: W.235
- Chain 6: F.21, L.24
- Ligands: CLA.211, LMG.227, LMG.250
- Chain e: G.23, A.27, G.28, G.31, T.32, W.34, F.38
4 PLIP interactions:2 interactions with chain e, 1 interactions with chain 6, 1 interactions with chain 1- Hydrophobic interactions: e:A.27, e:W.34, 6:L.24, 1:W.235
DGA.245: 9 residues within 4Å:- Chain 0: L.4, L.11
- Chain 7: L.21, A.22, F.25, Y.26, Y.29
- Ligands: DGD.224, LMG.226
7 PLIP interactions:2 interactions with chain 0, 5 interactions with chain 7- Hydrophobic interactions: 0:L.4, 0:L.11, 7:L.21, 7:F.25, 7:Y.26, 7:Y.26, 7:Y.26
- 14 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
LHG.63: 13 residues within 4Å:- Chain D: V.100, F.122, F.123
- Chain S: F.48
- Chain V: K.5, K.12
- Ligands: CLA.51, CLA.52, BCR.53, SQD.64, CHL.124, CLA.134, LHG.142
5 PLIP interactions:2 interactions with chain V, 1 interactions with chain S, 2 interactions with chain D- Hydrogen bonds: V:K.5
- Salt bridges: V:K.12
- Hydrophobic interactions: S:F.48, D:V.100, D:F.122
LHG.71: 16 residues within 4Å:- Chain A: T.212, N.226
- Chain B: W.4, Y.5, R.6, L.460, F.463, W.467
- Chain E: Y.137, F.265, F.269, V.272, T.273
- Ligands: CLA.25, CLA.27, LHG.82
12 PLIP interactions:6 interactions with chain B, 5 interactions with chain E, 1 interactions with chain A- Hydrophobic interactions: B:W.4, B:Y.5, B:Y.5, B:L.460, E:F.269, E:F.269, E:F.269, E:V.272, E:T.273
- Hydrogen bonds: B:Y.5, A:N.226
- Salt bridges: B:R.6
LHG.72: 22 residues within 4Å:- Chain E: I.252, F.253, V.255, A.256, F.257, S.258, W.262
- Chain L: N.14, S.16, Y.19, W.20, L.23
- Chain P: T.13, L.14, I.17, S.20, I.21
- Ligands: CLA.5, CLA.6, PHO.8, PL9.70, LHG.82
17 PLIP interactions:7 interactions with chain L, 5 interactions with chain E, 5 interactions with chain P- Hydrophobic interactions: L:Y.19, L:W.20, L:W.20, L:W.20, L:L.23, E:F.253, E:F.253, E:F.253, E:F.257, P:T.13, P:L.14, P:I.17, P:I.21, P:I.21
- Hydrogen bonds: L:N.14, L:S.16, E:S.258
LHG.73: 22 residues within 4Å:- Chain A: R.132, W.134, A.138, F.265, A.268, V.269, V.272, W.276
- Chain D: F.9, W.12, A.13, F.412, W.419, R.423
- Chain E: E.215, A.225, N.226, T.227, F.228
- Ligands: SQD.12, CLA.47, CLA.49
14 PLIP interactions:3 interactions with chain E, 8 interactions with chain A, 3 interactions with chain D- Hydrogen bonds: E:N.216, E:A.225, E:T.227, D:R.423
- Hydrophobic interactions: A:W.134, A:A.138, A:A.268, A:V.269, A:V.272, A:W.276, A:W.276, D:W.12, D:F.412
- Salt bridges: A:R.132
LHG.82: 26 residues within 4Å:- Chain A: S.224, N.226
- Chain B: P.3, W.4, Y.5
- Chain E: W.262, F.265, F.266, F.269
- Chain L: E.12, L.13, N.14, S.17, W.20, G.21, L.24, V.27
- Chain M: P.16, L.20
- Ligands: CLA.6, CLA.25, CLA.27, CLA.28, PL9.70, LHG.71, LHG.72
18 PLIP interactions:9 interactions with chain L, 3 interactions with chain E, 1 interactions with chain M, 2 interactions with chain B, 3 interactions with chain A- Hydrophobic interactions: L:W.20, L:W.20, L:L.24, L:L.24, L:V.27, L:V.27, E:F.266, E:F.269, E:F.269, M:L.20, B:W.4
- Hydrogen bonds: L:E.12, L:N.14, L:N.14, B:W.4, A:S.224, A:S.224, A:N.226
LHG.104: 12 residues within 4Å:- Chain T: N.11, Y.33, K.173, R.176, L.177, F.180
- Ligands: CHL.86, CLA.87, CLA.96, CLA.98, CLA.99, XAT.121
6 PLIP interactions:6 interactions with chain T- Hydrophobic interactions: T:R.176, T:F.180, T:F.180
- Hydrogen bonds: T:N.11, T:Y.33
- Salt bridges: T:K.173
LHG.123: 10 residues within 4Å:- Chain U: F.2, Y.31, K.172, R.175, F.179
- Ligands: CHL.105, CLA.106, CLA.115, CLA.117, XAT.161
4 PLIP interactions:4 interactions with chain U- Hydrophobic interactions: U:R.175, U:F.179, U:F.179
- Salt bridges: U:K.172
LHG.142: 14 residues within 4Å:- Chain V: W.6, K.12, Y.37, K.191, R.194, L.195, I.198
- Ligands: LHG.63, CHL.124, CLA.125, CLA.134, CLA.135, CLA.136, CLA.137
7 PLIP interactions:7 interactions with chain V- Hydrophobic interactions: V:R.194, V:I.198, V:I.198, V:I.198
- Hydrogen bonds: V:K.12
- Salt bridges: V:K.191, V:K.191
LHG.163: 14 residues within 4Å:- Chain W: Y.31, K.172, R.175, L.176, F.179
- Ligands: LMG.61, CHL.92, XAT.102, CHL.145, CLA.146, CLA.155, CLA.157, CLA.158, SPH.164
6 PLIP interactions:6 interactions with chain W- Hydrophobic interactions: W:R.175, W:L.176, W:F.179
- Hydrogen bonds: W:Y.31
- Salt bridges: W:K.172, W:K.172
LHG.229: 7 residues within 4Å:- Chain 1: V.100, F.122, F.123
- Ligands: CLA.217, CLA.218, BCR.219, SQD.230
1 PLIP interactions:1 interactions with chain 1- Hydrophobic interactions: 1:V.100
LHG.237: 16 residues within 4Å:- Chain 2: R.135, Y.137, R.261, F.265, F.269, V.272, T.273, M.277
- Chain 9: L.24
- Chain Z: W.4, Y.5, F.463, W.467
- Ligands: CLA.191, CLA.193, LHG.247
11 PLIP interactions:4 interactions with chain Z, 2 interactions with chain 9, 4 interactions with chain 2, 1 interactions with chain Y- Hydrophobic interactions: Z:W.4, Z:F.463, 9:L.24, 9:L.24, 2:F.269, 2:V.272
- Hydrogen bonds: Z:Y.5, 2:R.135, 2:R.261, Y:N.226
- Salt bridges: Z:R.6
LHG.238: 24 residues within 4Å:- Chain 2: I.252, F.253, V.255, A.256, F.257, S.258, N.259, W.262
- Chain 9: N.14, S.16, Y.19, W.20, L.23
- Chain Y: L.20, N.226
- Ligands: CLA.171, CLA.172, PHO.174, PL9.236, LHG.247
- Chain d: T.13, I.17, S.20, I.21
18 PLIP interactions:7 interactions with chain 2, 3 interactions with chain d, 2 interactions with chain Y, 6 interactions with chain 9- Hydrophobic interactions: 2:F.253, 2:F.253, 2:F.257, d:T.13, d:I.17, d:I.21, Y:L.20, 9:Y.19, 9:W.20, 9:W.20, 9:W.20, 9:L.23
- Hydrogen bonds: 2:S.258, 2:S.258, 2:S.258, 2:N.259, Y:N.226, 9:N.14
LHG.239: 17 residues within 4Å:- Chain 1: W.12, F.412, W.419
- Chain 2: E.215, N.216, A.225, N.226, T.227, F.228
- Chain Y: W.134, V.137, F.265, A.268, V.269, W.276
- Ligands: CLA.213, CLA.215
13 PLIP interactions:3 interactions with chain 1, 8 interactions with chain Y, 2 interactions with chain 2- Hydrophobic interactions: 1:F.412, 1:F.412, 1:W.419, Y:W.134, Y:V.137, Y:F.265, Y:F.265, Y:A.268, Y:V.269, Y:W.276, Y:W.276
- Hydrogen bonds: 2:N.216, 2:T.227
LHG.247: 28 residues within 4Å:- Chain 2: W.262, F.266, F.269
- Chain 9: E.12, L.13, N.14, S.17, W.20, G.21, L.24, I.25, V.27
- Chain Y: S.224, N.226
- Chain Z: P.3, W.4, Y.5
- Ligands: CLA.172, CLA.191, CLA.194, BCR.197, BCR.198, PL9.236, LHG.237, LHG.238
- Chain a: I.15, P.16, L.20
22 PLIP interactions:9 interactions with chain 9, 3 interactions with chain Y, 3 interactions with chain 2, 4 interactions with chain a, 3 interactions with chain Z- Hydrophobic interactions: 9:W.20, 9:W.20, 9:W.20, 9:L.24, 9:I.25, 9:V.27, 2:F.266, 2:F.269, 2:F.269, a:I.15, a:P.16, a:L.20, a:L.20, Z:W.4, Z:W.4
- Hydrogen bonds: 9:E.12, 9:N.14, 9:S.17, Y:S.224, Y:S.224, Y:N.226, Z:W.4
- 2 x LMK: trimethyl-[(2~{R})-1-oxidanyl-1-oxidanylidene-4-[(2~{S})-2-[(1~{S})-1-oxidanyloctadecoxy]-3-[(1~{R})-1-oxidanyloctadecoxy]propoxy]butan-2-yl]azanium(Non-covalent)
LMK.65: 19 residues within 4Å:- Chain D: V.37, Y.73, F.85, P.86, V.89, S.90, L.93, H.94, S.97
- Chain V: F.226, G.227, N.229, L.231, T.232, R.239
- Ligands: CLA.42, CLA.52, BCR.53, CLA.137
11 PLIP interactions:8 interactions with chain D, 3 interactions with chain V- Hydrophobic interactions: D:V.37, D:Y.73, D:P.86, D:V.89, D:L.93, D:L.93, D:L.93, V:F.226, V:F.226, V:L.231
- Hydrogen bonds: D:Y.73
LMK.231: 10 residues within 4Å:- Chain 1: V.37, Y.73, F.85, P.86, V.89, L.93, H.94, S.97
- Ligands: CLA.208, BCR.219
7 PLIP interactions:7 interactions with chain 1- Hydrophobic interactions: 1:V.37, 1:F.85, 1:P.86, 1:V.89, 1:V.89, 1:L.93, 1:L.93
- 2 x BCT: BICARBONATE ION(Non-functional Binders)
BCT.66: 8 residues within 4Å:- Chain A: H.207, E.236, Y.238, S.260, H.264
- Chain E: Y.240, K.260
- Ligands: FE2.2
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain E- Hydrogen bonds: A:S.260, A:S.260, E:K.260
BCT.232: 8 residues within 4Å:- Chain 2: T.239, Y.240, K.260
- Chain Y: E.236, Y.238, S.260, H.264
- Ligands: FE2.168
4 PLIP interactions:3 interactions with chain Y, 1 interactions with chain 2- Hydrogen bonds: Y:E.236, Y:Y.238, Y:H.264, 2:K.260
- 2 x PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE(Non-covalent)
PL9.70: 36 residues within 4Å:- Chain A: Y.40, I.41, F.44, I.69
- Chain E: M.194, M.195, A.198, G.199, G.202, L.205, L.206, I.209, H.210, T.213, Y.240, M.242, A.245, N.246, W.249, A.256, F.257, L.263, F.266, F.269, V.270, T.273, G.274
- Chain L: W.20, L.24, V.27, L.31
- Chain P: L.10
- Ligands: CLA.6, PHO.8, LHG.72, LHG.82
27 PLIP interactions:18 interactions with chain E, 1 interactions with chain P, 6 interactions with chain A, 2 interactions with chain L- Hydrophobic interactions: E:M.194, E:M.195, E:L.205, E:L.206, E:I.209, E:Y.240, E:A.245, E:W.249, E:F.257, E:F.257, E:L.263, E:F.266, E:F.266, E:F.269, E:V.270, E:T.273, P:L.10, A:Y.40, A:I.41, A:F.44, A:F.44, A:F.44, A:I.69, L:W.20, L:L.24
- Hydrogen bonds: E:H.210, E:F.257
PL9.236: 33 residues within 4Å:- Chain 2: M.194, M.195, A.198, G.199, L.205, L.206, I.209, H.210, T.213, Y.240, M.242, A.245, W.249, A.256, F.257, L.263, F.266, F.269, V.270
- Chain 9: W.20, L.24, V.27, V.30, L.31
- Chain Y: Y.40, I.41, F.44
- Ligands: CLA.172, PHO.174, LHG.238, LHG.247
- Chain d: L.10, L.14
32 PLIP interactions:17 interactions with chain 2, 7 interactions with chain 9, 4 interactions with chain Y, 4 interactions with chain d- Hydrophobic interactions: 2:A.198, 2:L.205, 2:L.206, 2:I.209, 2:T.213, 2:Y.240, 2:A.245, 2:W.249, 2:F.257, 2:F.257, 2:F.257, 2:L.263, 2:F.266, 2:F.269, 2:V.270, 9:W.20, 9:L.24, 9:V.27, 9:V.27, 9:V.27, 9:V.30, 9:L.31, Y:Y.40, Y:I.41, Y:F.44, Y:F.44, d:L.10, d:L.10, d:L.10, d:L.14
- Hydrogen bonds: 2:T.213, 2:F.257
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.75: 15 residues within 4Å:- Chain F: R.2, I.7, Y.13, I.16, H.17, V.21, L.24
- Chain G: I.1, R.5, W.6, I.9, H.10, A.13, V.14, I.17
13 PLIP interactions:8 interactions with chain G, 5 interactions with chain F,- Hydrophobic interactions: G:I.9, G:A.13, F:I.7, F:I.16, F:V.21
- Salt bridges: G:R.5, F:R.2
- pi-Stacking: G:W.6, G:W.6, G:H.10, G:H.10, F:Y.13
- Metal complexes: G:H.10
HEM.241: 14 residues within 4Å:- Chain 3: I.7, Y.13, I.16, H.17, T.20, V.21
- Chain 4: I.1, R.5, W.6, I.9, H.10, A.13, V.14, I.17
15 PLIP interactions:7 interactions with chain 3, 8 interactions with chain 4,- Hydrophobic interactions: 3:I.7, 3:Y.13, 3:T.20, 3:V.21, 4:I.1, 4:W.6, 4:I.9, 4:A.13, 4:V.14
- pi-Stacking: 3:Y.13, 3:H.17, 4:W.6, 4:H.10
- Metal complexes: 3:H.17
- Salt bridges: 4:R.5
- 2 x RRX: (3R)-beta,beta-caroten-3-ol(Non-covalent)
RRX.76: 16 residues within 4Å:- Chain B: L.207
- Chain H: M.32, A.35, I.36, L.38, F.39, V.41, F.42, I.45
- Chain R: S.1, L.6
- Ligands: CLA.15, CLA.16, CLA.17, CLA.23, CLA.24
5 PLIP interactions:4 interactions with chain H, 1 interactions with chain B- Hydrophobic interactions: H:F.39, H:F.39, H:V.41, H:F.42, B:L.207
RRX.242: 12 residues within 4Å:- Chain 5: A.35, I.36, L.38, F.39, I.45, L.56
- Ligands: CLA.181, CLA.183, CLA.189, CLA.190
- Chain f: S.1, L.6
8 PLIP interactions:6 interactions with chain 5, 2 interactions with chain f- Hydrophobic interactions: 5:A.35, 5:I.36, 5:F.39, 5:F.39, 5:F.39, 5:I.45, f:L.6, f:L.6
- 1 x GOL: GLYCEROL(Non-functional Binders)
GOL.78: 2 residues within 4Å:- Chain I: T.3
- Ligands: 4RF.79
No protein-ligand interaction detected (PLIP)- 4 x 4RF: Tripalmitoylglycerol(Non-covalent)
4RF.79: 12 residues within 4Å:- Chain I: T.3, L.4, F.7, T.10, F.14
- Chain Q: T.29, T.32
- Chain Z: I.89
- Ligands: SPH.14, GOL.78, CLA.186, SQD.205
7 PLIP interactions:4 interactions with chain I, 1 interactions with chain Z, 2 interactions with chain Q- Hydrophobic interactions: I:T.3, I:F.7, I:F.7, I:F.14, Z:I.89, Q:T.29, Q:T.32
4RF.81: 11 residues within 4Å:- Chain A: Y.254
- Chain D: W.11
- Chain F: P.3, S.5, L.8
- Chain J: L.6, W.7
- Chain K: S.35, F.36
- Ligands: SQD.12, BCR.55
5 PLIP interactions:1 interactions with chain D, 1 interactions with chain A, 1 interactions with chain F, 2 interactions with chain K- Hydrophobic interactions: D:W.11, A:Y.254, F:L.8, K:F.36, K:F.36
4RF.244: 10 residues within 4Å:- Chain 6: M.1, T.3, L.4, I.6, F.7, F.14
- Chain B: I.89
- Ligands: CLA.20, SQD.39, SPH.180
7 PLIP interactions:7 interactions with chain 6- Hydrophobic interactions: 6:I.6, 6:F.7, 6:F.7, 6:F.7, 6:F.14, 6:F.14
- Hydrogen bonds: 6:M.1
4RF.246: 10 residues within 4Å:- Chain 1: W.11
- Chain 3: P.3, F.4, S.5
- Chain 7: L.6
- Chain 8: A.32, S.35, F.36
- Ligands: SQD.178, BCR.221
6 PLIP interactions:3 interactions with chain 8, 2 interactions with chain 7, 1 interactions with chain 1- Hydrophobic interactions: 8:F.36, 8:F.36, 8:F.36, 7:L.6, 7:L.6, 1:W.11
- 21 x CHL: CHLOROPHYLL B(Non-covalent)
CHL.86: 15 residues within 4Å:- Chain T: N.11, K.12, W.13, L.14, G.15, W.35, F.180
- Chain U: L.116, Q.119, G.124
- Ligands: CLA.87, LHG.104, CHL.111, CHL.113, XAT.121
5 PLIP interactions:4 interactions with chain T, 1 interactions with chain U,- Hydrophobic interactions: T:N.11, T:L.14, T:W.35, T:W.35, U:L.116
CHL.90: 22 residues within 4Å:- Chain T: S.108, L.109, I.110, H.111, A.112, Q.113, N.114, T.118, V.121
- Chain V: L.67, A.70, I.74, L.78, N.81
- Ligands: CHL.91, CLA.127, CLA.128, CLA.133, CLA.134, LUT.139, NEX.141, 3PH.144
9 PLIP interactions:6 interactions with chain T, 3 interactions with chain V,- Hydrophobic interactions: T:A.112, T:V.121, V:L.67, V:A.70, V:N.81
- Hydrogen bonds: T:I.110, T:Q.113, T:N.114
- Metal complexes: T:I.110
CHL.91: 15 residues within 4Å:- Chain T: W.60, L.101, I.110, A.112, I.115, T.118, V.121, Q.122
- Ligands: CLA.89, CHL.90, CHL.92, CHL.94, LUT.101, NEX.103, 3PH.144
8 PLIP interactions:8 interactions with chain T,- Hydrophobic interactions: T:W.60, T:L.101, T:L.101, T:I.110, T:A.112, T:I.115, T:Q.122
- Hydrogen bonds: T:T.118
CHL.92: 26 residues within 4Å:- Chain T: W.88, F.89, K.90, A.91, G.92, A.93, I.95, F.96, I.115, L.119, F.186, A.189, I.190
- Chain W: F.212, A.215, T.216, F.218, V.219, P.220
- Ligands: CLA.88, CHL.91, CHL.94, LUT.101, XAT.102, CHL.145, LHG.163
15 PLIP interactions:11 interactions with chain T, 4 interactions with chain W,- Hydrophobic interactions: T:W.88, T:F.89, T:I.95, T:F.96, T:I.115, T:L.119, T:F.186, T:A.189, T:I.190, W:F.212, W:F.212, W:A.215, W:V.219
- Hydrogen bonds: T:G.92, T:A.93
CHL.93: 18 residues within 4Å:- Chain T: I.56, R.59, W.60, M.126, V.129, Y.132, R.133, G.137, P.138, A.139, G.140, P.145, P.148, F.152
- Ligands: CLA.89, CLA.95, LUT.100, NEX.103
11 PLIP interactions:11 interactions with chain T,- Hydrophobic interactions: T:V.129, T:V.129, T:Y.132, T:Y.132, T:R.133, T:P.148, T:F.152
- Hydrogen bonds: T:R.59, T:G.137, T:A.139, T:G.140
CHL.94: 23 residues within 4Å:- Chain T: E.52, L.53, I.56, H.57, W.60, Q.122, V.123, M.126, G.127, E.130, R.133, V.134, L.183, F.186
- Chain W: W.33, T.35
- Ligands: CLA.88, CHL.91, CHL.92, CLA.107, CHL.145, CLA.146, LUT.160
14 PLIP interactions:12 interactions with chain T, 2 interactions with chain W,- Hydrophobic interactions: T:L.53, T:W.60, T:W.60, T:W.60, T:V.123, T:E.130, T:V.134, T:L.183, T:F.186, W:T.35
- Hydrogen bonds: T:Q.122, W:T.35
- Salt bridges: T:R.133
- pi-Cation interactions: T:R.133
CHL.105: 14 residues within 4Å:- Chain U: A.8, K.9, F.10, L.11, F.14, Y.31, W.33, F.179
- Chain W: G.125
- Ligands: CLA.106, LHG.123, CHL.151, CHL.153, XAT.161
7 PLIP interactions:7 interactions with chain U,- Hydrophobic interactions: U:A.8, U:F.10, U:L.11, U:F.14, U:Y.31, U:W.33
- Metal complexes: U:F.10
CHL.109: 8 residues within 4Å:- Chain U: S.105, L.106, I.107, H.108, Q.110, S.111, T.115
- Ligands: CHL.110
2 PLIP interactions:2 interactions with chain U,- Hydrogen bonds: U:Q.110, U:S.111
CHL.110: 16 residues within 4Å:- Chain U: W.58, G.89, I.92, L.98, I.107, A.109, T.115, V.118, Q.119, L.122, M.123
- Ligands: CLA.108, CHL.109, CHL.111, LUT.120, NEX.122
5 PLIP interactions:5 interactions with chain U,- Hydrophobic interactions: U:W.58, U:I.92, U:I.107, U:A.109, U:L.122
CHL.111: 22 residues within 4Å:- Chain T: F.213, A.216, T.217, F.219, T.220, P.221
- Chain U: F.86, K.87, A.88, G.89, A.90, F.93, I.112, L.116, Q.119, I.189
- Ligands: CHL.86, CLA.107, CHL.110, CHL.113, LUT.120, XAT.121
9 PLIP interactions:8 interactions with chain U, 1 interactions with chain T,- Hydrophobic interactions: U:F.86, U:F.93, U:I.112, U:L.116, U:I.189, T:F.213
- Hydrogen bonds: U:G.89, U:A.90, U:Q.119
CHL.112: 13 residues within 4Å:- Chain U: I.54, R.57, W.58, Y.129, R.130, G.133, G.134, F.138, T.144, P.147, F.151
- Ligands: CLA.114, NEX.122
7 PLIP interactions:7 interactions with chain U,- Hydrophobic interactions: U:Y.129, U:Y.129, U:R.130, U:F.138, U:P.147
- Hydrogen bonds: U:G.134
- pi-Stacking: U:F.151
CHL.113: 20 residues within 4Å:- Chain T: W.13, W.35, T.37
- Chain U: E.50, I.51, I.54, H.55, W.58, Q.119, V.120, M.123, G.124, E.127, R.130
- Ligands: CHL.86, CLA.87, LUT.101, CLA.107, CHL.111, CLA.147
9 PLIP interactions:7 interactions with chain U, 2 interactions with chain T,- Hydrophobic interactions: U:I.51, U:I.54, U:V.120, T:W.13, T:T.37
- Hydrogen bonds: U:Q.119
- Salt bridges: U:R.130
- pi-Cation interactions: U:R.130, U:R.130
CHL.124: 11 residues within 4Å:- Chain V: L.13, F.14, L.15, P.16, Y.37, Y.39, P.41
- Ligands: CLA.52, LHG.63, CLA.125, LHG.142
5 PLIP interactions:5 interactions with chain V,- Hydrophobic interactions: V:F.14, V:L.15, V:P.16, V:Y.37
- Metal complexes: V:F.14
CHL.129: 14 residues within 4Å:- Chain V: G.94, M.97, N.115, L.117, V.122, I.125, E.126, L.129, L.130
- Ligands: CLA.127, CHL.130, CLA.132, LUT.140, NEX.141
4 PLIP interactions:4 interactions with chain V,- Hydrophobic interactions: V:V.122, V:L.129, V:L.130, V:L.130
CHL.130: 10 residues within 4Å:- Chain V: F.91, E.92, G.94, A.95, L.98, T.123, E.126
- Ligands: CHL.129, CLA.132, LUT.140
4 PLIP interactions:4 interactions with chain V,- Hydrophobic interactions: V:F.91, V:L.98
- Hydrogen bonds: V:G.94, V:A.95
CHL.131: 17 residues within 4Å:- Chain V: L.60, R.63, W.64, L.129, V.133, F.136, R.137, G.140, T.141, G.142, F.158, L.164, P.166, F.170
- Ligands: CLA.133, CLA.138, NEX.141
9 PLIP interactions:9 interactions with chain V,- Hydrophobic interactions: V:L.129, V:F.136, V:F.136, V:R.137, V:P.166, V:P.166
- Hydrogen bonds: V:R.63
- pi-Stacking: V:F.170, V:F.170
CHL.145: 17 residues within 4Å:- Chain T: L.119, Q.122, V.123, G.127
- Chain W: P.9, L.10, F.11, L.12, G.13, Y.31, W.33
- Ligands: CLA.88, CHL.92, CHL.94, XAT.102, CLA.146, LHG.163
5 PLIP interactions:2 interactions with chain T, 3 interactions with chain W,- Hydrophobic interactions: T:L.119, T:V.123, W:P.9, W:W.33
- Metal complexes: W:F.11
CHL.149: 10 residues within 4Å:- Chain W: N.106, L.107, I.108, H.109, A.110, Q.111, S.112, T.116
- Ligands: CLA.148, CHL.150
7 PLIP interactions:7 interactions with chain W,- Hydrophobic interactions: W:I.108, W:A.110, W:Q.111
- Hydrogen bonds: W:I.108, W:Q.111, W:S.112
- Metal complexes: W:I.108
CHL.150: 16 residues within 4Å:- Chain W: W.58, L.99, I.108, A.110, I.113, T.116, V.119, Q.120, V.123, M.124
- Ligands: CLA.148, CHL.149, CHL.151, CHL.153, LUT.160, NEX.162
5 PLIP interactions:5 interactions with chain W,- Hydrophobic interactions: W:W.58, W:I.108, W:A.110, W:I.113, W:V.123
CHL.151: 20 residues within 4Å:- Chain U: F.212, A.215, T.216, F.218, T.219
- Chain W: F.87, K.88, G.90, A.91, I.113, L.117, Q.120, F.185, A.188
- Ligands: CHL.105, CLA.147, CHL.150, CHL.153, LUT.160, XAT.161
10 PLIP interactions:8 interactions with chain W, 2 interactions with chain U,- Hydrophobic interactions: W:F.87, W:L.117, W:F.185, W:F.185, W:A.188, U:F.212, U:F.212
- Hydrogen bonds: W:G.90, W:A.91, W:Q.120
CHL.153: 20 residues within 4Å:- Chain U: W.33, T.35
- Chain W: R.47, I.51, I.54, H.55, W.58, Q.120, V.121, M.124, G.125, E.128, R.131, L.182, F.185
- Ligands: CHL.105, CLA.106, CLA.147, CHL.150, CHL.151
10 PLIP interactions:9 interactions with chain W, 1 interactions with chain U,- Hydrophobic interactions: W:I.54, W:W.58, W:W.58, W:L.182, W:F.185, U:T.35
- Hydrogen bonds: W:Q.120
- Salt bridges: W:R.131
- pi-Cation interactions: W:R.131, W:R.131
- 8 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
LUT.100: 18 residues within 4Å:- Chain T: L.62, L.63, A.65, F.152, D.153, P.154, L.155, L.177, A.181, F.185, Q.188, P.196, L.200
- Ligands: CHL.93, CLA.95, CLA.97, CLA.98, CLA.99
11 PLIP interactions:11 interactions with chain T- Hydrophobic interactions: T:L.62, T:L.63, T:A.65, T:L.155, T:L.177, T:A.181, T:F.185, T:F.185, T:L.200
- Hydrogen bonds: T:L.155, T:Q.188
LUT.101: 22 residues within 4Å:- Chain T: W.35, D.36, T.37, A.38, H.57, A.61, L.63, G.64, G.67, M.68, W.88, A.91, M.179, C.182, L.183
- Ligands: CLA.87, CLA.88, CLA.89, CHL.91, CHL.92, CLA.107, CHL.113
8 PLIP interactions:8 interactions with chain T- Hydrophobic interactions: T:W.35, T:W.35, T:A.61, T:M.179, T:L.183
- Hydrogen bonds: T:T.37, T:A.38, T:W.88
LUT.119: 17 residues within 4Å:- Chain U: L.60, A.63, L.64, F.151, D.152, P.153, L.154, L.176, S.180, F.184, Q.187, P.195, N.198
- Ligands: CLA.114, CLA.116, CLA.117, CLA.118
12 PLIP interactions:12 interactions with chain U- Hydrophobic interactions: U:L.60, U:L.60, U:A.63, U:L.64, U:L.154, U:F.184, U:F.184
- Hydrogen bonds: U:D.152, U:L.154, U:Q.187, U:P.195, U:L.199
LUT.120: 20 residues within 4Å:- Chain U: W.33, D.34, T.35, A.36, L.38, H.55, A.59, G.62, G.65, I.66, W.85, M.178, C.181, L.182
- Ligands: CLA.106, CLA.107, CLA.108, CHL.110, CHL.111, CLA.147
12 PLIP interactions:12 interactions with chain U- Hydrophobic interactions: U:W.33, U:A.36, U:L.38, U:A.59, U:I.66, U:W.85, U:W.85, U:M.178, U:L.182
- Hydrogen bonds: U:T.35, U:A.36, U:W.85
LUT.139: 22 residues within 4Å:- Chain V: M.66, A.69, F.170, D.171, P.172, L.173, N.174, N.192, L.195, A.199, A.202, F.203, Q.206, P.214, N.217, I.218
- Ligands: CHL.90, CLA.133, CLA.134, CLA.135, CLA.136, CLA.137
17 PLIP interactions:17 interactions with chain V- Hydrophobic interactions: V:M.66, V:A.69, V:L.173, V:L.195, V:L.195, V:A.199, V:A.202, V:F.203, V:F.203, V:I.218, V:I.218
- Hydrogen bonds: V:D.171, V:L.173, V:N.174, V:Q.206, V:P.214, V:I.218
LUT.140: 17 residues within 4Å:- Chain V: Y.39, D.40, P.41, L.42, A.68, G.71, I.72, W.90, T.93, M.197, V.200
- Ligands: CLA.125, CLA.126, CLA.127, CHL.129, CHL.130, CLA.132
9 PLIP interactions:9 interactions with chain V- Hydrophobic interactions: V:Y.39, V:L.42, V:A.68, V:I.72, V:M.197
- Hydrogen bonds: V:D.40, V:L.42, V:T.93, V:T.93
LUT.159: 18 residues within 4Å:- Chain W: L.60, A.63, L.64, F.151, D.152, P.153, L.154, S.180, F.184, Q.187, P.195, N.198, L.199
- Ligands: CLA.152, CLA.154, CLA.156, CLA.157, CLA.158
10 PLIP interactions:10 interactions with chain W- Hydrophobic interactions: W:L.60, W:A.63, W:L.64, W:F.184, W:F.184, W:L.199
- Hydrogen bonds: W:D.152, W:L.154, W:Q.187, W:L.199
LUT.160: 23 residues within 4Å:- Chain W: W.33, D.34, T.35, A.36, F.38, H.55, A.59, G.62, G.65, I.66, W.86, A.89, M.178, C.181, L.182, F.185
- Ligands: CLA.88, CHL.94, CLA.146, CLA.147, CLA.148, CHL.150, CHL.151
12 PLIP interactions:12 interactions with chain W- Hydrophobic interactions: W:W.33, W:W.33, W:F.38, W:A.59, W:I.66, W:W.86, W:M.178, W:L.182
- Hydrogen bonds: W:D.34, W:T.35, W:T.35, W:A.36
- 3 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
XAT.102: 16 residues within 4Å:- Chain T: L.119, V.123
- Chain W: V.190, A.211, F.212, S.214, A.215, F.218
- Ligands: LMG.61, CHL.92, CHL.145, CLA.155, CLA.157, CLA.158, LHG.163, SPH.164
6 PLIP interactions:2 interactions with chain T, 4 interactions with chain W- Hydrophobic interactions: T:L.119, T:V.123, W:V.190, W:A.211, W:F.212, W:A.215
XAT.121: 12 residues within 4Å:- Chain T: A.212, F.213, Y.215, A.216
- Chain U: L.116, V.120
- Ligands: CHL.86, CLA.96, CLA.98, CLA.99, LHG.104, CHL.111
3 PLIP interactions:2 interactions with chain T, 1 interactions with chain U- Hydrophobic interactions: T:F.213, T:A.216, U:V.120
XAT.161: 12 residues within 4Å:- Chain U: A.211, F.212, A.215, F.218
- Chain W: L.117, V.121
- Ligands: CHL.105, CLA.115, CLA.117, CLA.118, LHG.123, CHL.151
5 PLIP interactions:3 interactions with chain U, 2 interactions with chain W- Hydrophobic interactions: U:A.211, U:F.212, U:A.215, W:L.117, W:V.121
- 4 x NEX: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL(Non-covalent)
NEX.103: 13 residues within 4Å:- Chain T: W.60, Y.103, L.125, M.126, L.128, V.129, Y.132, P.138
- Ligands: CLA.89, CHL.91, CHL.93, CLA.95, CLA.135
6 PLIP interactions:4 interactions with chain T, 2 interactions with chain V- Hydrophobic interactions: T:W.60, T:L.128, T:P.138, T:P.138
- Hydrogen bonds: V:K.188, V:K.188
NEX.122: 7 residues within 4Å:- Chain U: Y.100, L.122, L.125
- Ligands: CLA.108, CHL.110, CHL.112, CLA.114
1 PLIP interactions:1 interactions with chain U- Hydrophobic interactions: U:L.122
NEX.141: 10 residues within 4Å:- Chain V: W.64, Y.105, L.129, V.133
- Ligands: CHL.90, CLA.127, CLA.128, CHL.129, CHL.131, CLA.138
4 PLIP interactions:4 interactions with chain V- Hydrophobic interactions: V:W.64, V:L.129, V:L.129
- Hydrogen bonds: V:Y.105
NEX.162: 10 residues within 4Å:- Chain W: W.58, Y.101, V.123, M.124, A.126, P.137
- Ligands: CLA.148, CHL.150, CLA.152, CLA.154
4 PLIP interactions:4 interactions with chain W- Hydrophobic interactions: W:W.58, W:A.126, W:P.137, W:P.137
- 1 x LPX: (2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate(Non-covalent)
LPX.143: 8 residues within 4Å:- Chain D: L.153, Y.157, F.158
- Chain V: L.222, S.223
- Ligands: SQD.64, CLA.137, 3PH.144
2 PLIP interactions:2 interactions with chain V- Hydrophobic interactions: V:L.222
- Hydrogen bonds: V:S.223
- 2 x PTY: PHOSPHATIDYLETHANOLAMINE(Non-covalent)
PTY.165: 14 residues within 4Å:- Chain D: A.182, W.215, T.218, L.219
- Chain T: I.95, F.96, Q.113, N.114, I.115, V.116
- Chain W: G.207, V.208
- Ligands: CLA.157, CLA.158
7 PLIP interactions:6 interactions with chain D, 1 interactions with chain T- Hydrophobic interactions: D:A.182, D:W.215, D:W.215, D:W.215, D:T.218, D:L.219
- Hydrogen bonds: T:N.114
PTY.166: 6 residues within 4Å:- Chain W: L.71, K.74, N.75, I.196, Q.200
- Ligands: LMG.85
4 PLIP interactions:4 interactions with chain W- Hydrophobic interactions: W:Q.200
- Hydrogen bonds: W:N.75, W:Q.200
- Salt bridges: W:K.74
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Caspy, I. et al., Structure of Dunaliella Photosystem II reveals conformational flexibility of stacked and unstacked supercomplexes. Elife (2023)
- Release Date
- 2022-08-17
- Peptides
- Photosystem II protein D1: AY
Photosystem II CP47 reaction center protein: BZ
Photosystem II reaction center protein Ycf12: C0
Photosystem II CP43 reaction center protein: D1
Photosystem II D2 protein: E2
Cytochrome b559 subunit alpha: F3
Cytochrome b559 subunit beta: G4
Photosystem II reaction center protein H: H5
Photosystem II reaction center protein I: I6
Photosystem II reaction center protein J: J7
Photosystem II reaction center protein K: K8
Photosystem II reaction center protein L: L9
Photosystem II reaction center protein M: Ma
PsbO: Nb
PsbP: Oc
Photosystem II reaction center protein T: Pd
PsbW: Qe
PsbX: Rf
Photosystem II reaction center protein Z: Sg
Chlorophyll a-b binding protein of LHCII type I, chloroplastic: T
Chlorophyll a-b binding protein, chloroplastic: U
CP26: V
LHCII M1: W
PsbU: Xh - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AY
aB
BZ
bC
V0
vD
C1
cE
D2
dF
E3
eG
F4
fH
H5
hI
I6
iJ
J7
jK
K8
kL
L9
lM
Ma
mN
Ob
oO
Pc
pP
Td
tQ
We
wR
Xf
xS
Zg
zT
NU
GV
SW
YX
Uh
u - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 7pnk.1
Unstacked compact Dunaliella PSII
Photosystem II protein D1
Toggle Identical (AY)Photosystem II CP47 reaction center protein
Toggle Identical (BZ)Photosystem II reaction center protein Ycf12
Toggle Identical (C0)Photosystem II CP43 reaction center protein
Toggle Identical (D1)Photosystem II D2 protein
Toggle Identical (E2)Cytochrome b559 subunit alpha
Toggle Identical (F3)Cytochrome b559 subunit beta
Toggle Identical (G4)Photosystem II reaction center protein H
Toggle Identical (H5)Photosystem II reaction center protein I
Toggle Identical (I6)Photosystem II reaction center protein J
Toggle Identical (J7)Photosystem II reaction center protein K
Toggle Identical (K8)Photosystem II reaction center protein L
Toggle Identical (L9)Photosystem II reaction center protein M
Toggle Identical (Ma)PsbO
Toggle Identical (Nb)PsbP
Toggle Identical (Oc)Photosystem II reaction center protein T
Toggle Identical (Pd)PsbW
Toggle Identical (Qe)PsbX
Toggle Identical (Rf)Photosystem II reaction center protein Z
Toggle Identical (Sg)Chlorophyll a-b binding protein of LHCII type I, chloroplastic
Chlorophyll a-b binding protein, chloroplastic
CP26
LHCII M1
PsbU
Toggle Identical (Xh)Related Entries With Identical Sequence
7pi0.1 | 7pi5.1 | 7pin.1 | 7pin.2 | 7pin.3 | 7pin.4 | 7pin.5 | 7pin.6 | 7pin.7 | 7pin.8 | 7pin.9 | 7pin.10 | 7pin.11 | 7pin.12 | 7pin.13 | 7pin.15 | 7pin.16 | 7pin.17 | 7pin.18 | 7pin.19 | 7pin.20 | 7pin.21 | 7pin.23 | 7pin.25 | 7pin.26 | 7pin.27 | 7pin.28 | 7pin.29 | 7pin.30 | 7pin.31 more...less...7pin.32 | 7pin.33 | 7pin.34 | 7pin.35 | 7pin.36 | 7pin.37 | 7pin.38 | 7pin.40 | 7pin.41 | 7pin.42 | 7pin.43 | 7pin.44 | 7pin.45 | 7pin.46 | 7pin.48 | 7pin.50 | 7pin.51 | 7pin.52 | 7pin.53 | 7pin.54 | 7pin.55 | 7pin.56 | 7pin.57 | 7pin.58 | 7pin.59 | 7pin.60 | 7pin.61 | 7pin.62 | 7pin.63 | 7pin.65 | 7pin.66 | 7pin.67 | 7pin.68 | 7pin.69 | 7pin.70 | 7pin.71 | 7pin.73 | 7pin.75 | 7pin.76 | 7pin.77 | 7pin.78 | 7pin.79 | 7pin.80 | 7pin.81 | 7pin.82 | 7pin.83 | 7pin.84 | 7pin.85 | 7pin.86 | 7pin.87 | 7pin.89 | 7pin.90 | 7pin.91 | 7pin.92 | 7pin.93 | 7pin.94 | 7pin.95 | 7pin.97 | 7pin.99 | 7piw.1 | 7piw.2 | 7piw.3 | 7piw.4 | 7piw.5 | 7piw.6 | 7piw.7 | 7piw.8 | 7piw.9 | 7piw.10 | 7piw.11 | 7piw.12 | 7piw.15 | 7piw.16 | 7piw.17 | 7piw.18 | 7piw.19 | 7piw.20 | 7piw.21 | 7piw.23 | 7piw.25 | 7piw.26 | 7piw.27 | 7piw.28 | 7piw.29 | 7piw.30 | 7piw.31 | 7piw.32 | 7piw.33 | 7piw.34 | 7piw.35 | 7piw.36 | 7piw.37 | 7piw.40 | 7piw.41 | 7piw.42 | 7piw.43 | 7piw.44 | 7piw.45 | 7piw.46 | 7piw.48 | 7piw.50 | 7piw.51 | 7piw.52 | 7piw.53 | 7piw.54 | 7piw.55 | 7piw.56 | 7piw.57 | 7piw.58 | 7piw.59 | 7piw.60 | 7piw.61 | 7piw.62 | 7piw.63 | 7piw.65 | 7piw.66 | 7piw.67 | 7piw.68 | 7piw.69 | 7piw.70 | 7piw.71 | 7piw.73 | 7piw.75 | 7piw.76 | 7piw.77 | 7piw.78 | 7piw.79 | 7piw.80 | 7piw.81 | 7piw.82 | 7piw.83 | 7piw.84 | 7piw.85 | 7piw.86 | 7piw.87 | 7piw.89 | 7piw.90 | 7piw.91 | 7piw.92 | 7piw.93 | 7piw.94 | 7piw.95 | 7piw.97 | 7piw.99