SMTL ID : 7rau.1

Structure of TRPV3 in complex with osthole

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

8 x A0O: 7-methoxy-8-(3-methylbut-2-enyl)chromen-2-one(Non-covalent)

A0O.1: 6 residues within 4Å: Chain A: S.444, I.497, K.500, E.501, Y.565, M.706 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.501 Salt bridges: A:K.500 A0O.2: 5 residues within 4Å: Chain A: L.420, H.426, L.429, H.430, R.693 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.429, A:H.430, A:R.693 Salt bridges: A:H.426, A:R.693 pi-Cation interactions: A:R.693 A0O.3: 6 residues within 4Å: Chain B: S.444, I.497, K.500, E.501, Y.565, M.706 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.501 Salt bridges: B:K.500 A0O.4: 5 residues within 4Å: Chain B: L.420, H.426, L.429, H.430, R.693 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:L.429, B:H.430, B:R.693 Salt bridges: B:H.426, B:R.693 pi-Cation interactions: B:R.693 A0O.5: 6 residues within 4Å: Chain C: S.444, I.497, K.500, E.501, Y.565, M.706 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:E.501 Salt bridges: C:K.500 A0O.6: 5 residues within 4Å: Chain C: L.420, H.426, L.429, H.430, R.693 6 PLIP interactions: 6 interactions with chain C Hydrophobic interactions: C:L.429, C:H.430, C:R.693 Salt bridges: C:H.426, C:R.693 pi-Cation interactions: C:R.693 A0O.7: 6 residues within 4Å: Chain D: S.444, I.497, K.500, E.501, Y.565, M.706 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:E.501 Salt bridges: D:K.500 A0O.8: 5 residues within 4Å: Chain D: L.420, H.426, L.429, H.430, R.693 6 PLIP interactions: 6 interactions with chain D Hydrophobic interactions: D:L.429, D:H.430, D:R.693 Salt bridges: D:H.426, D:R.693 pi-Cation interactions: D:R.693

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Neuberger, A. et al., Structural mechanism of TRPV3 channel inhibition by the plant-derived coumarin osthole. Embo Rep. (2021)

Release Date

2021-09-08

Peptides

Transient receptor potential cation channel subfamily V member 3: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Transient receptor potential cation channel subfamily V member 3

Related Entries With Identical Sequence