SMTL ID : 7ryl.1

T cell receptor CO3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: S.201, T.203, F.204 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.201, A:T.203 Water bridges: A:S.201, A:S.201

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: Q.179 Chain B: Q.40, P.42, K.44, R.110 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:Q.40, A:Q.179 Water bridges: B:R.110 Salt bridges: B:K.44, B:R.110 SO4.3: 3 residues within 4Å: Chain B: S.10, K.89, R.110 6 PLIP interactions: 5 interactions with chain B, 1 interactions with chain A Water bridges: B:K.89, B:K.89, B:G.108, A:E.42 Salt bridges: B:K.89, B:R.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wegrecki, M. et al., Atypical sideways recognition of CD1a by autoreactive gamma delta T cell receptors. Nat Commun (2022)

Release Date

2022-05-18

Peptides

T cell receptor gamma variable 4,T cell receptor beta constant 1: A
T cell receptor delta variable 1,T cell receptor alpha chain constant: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

T cell receptor gamma variable 4,T cell receptor beta constant 1

T cell receptor delta variable 1,T cell receptor alpha chain constant

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