SMTL ID : 7rzz.1

Crystal structure of FBF-2 in complex with LST-1 site A peptide and compact FBE RNA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.39 Å

Oligo State

hetero-1-1-mer

Ligands

1 x C- U- G- U- G- A- A- U- G: RNA(Non-covalent)

C-U-G-U-G-A-A-U-G.1: 39 residues within 4Å: Chain A: I.79, N.82, Y.83, Q.86, K.122, F.123, C.125, R.126, Q.129, Q.160, N.161, N.163, H.164, Q.167, K.198, Y.199, C.201, R.202, Q.205, E.250, Y.251, N.253, Y.254, Q.257, K.288, F.289, S.291, H.292, E.295, F.333, Q.335, F.336, N.338, Y.339, Q.342, F.390, S.391, S.392, K.395 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Qiu, C. et al., Bipartite interaction sites differentially modulate RNA-binding affinity of a protein complex essential for germline stem cell self-renewal. Nucleic Acids Res. (2022)

Release Date

2022-04-13

Peptides

Fem-3 mRNA-binding factor 2: A
Lateral Signaling Target: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Fem-3 mRNA-binding factor 2

Lateral Signaling Target

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