SMTL ID : 7s62.1

Locally refined protomer structure of native-form oocyte/egg Alpha-2-Macroglobulin (A2Moo) tetramer

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

17 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: E.59, N.64 Ligand excluded by PLIP NAG.2: 3 residues within 4Å: Chain A: I.67, N.81, K.82 Ligand excluded by PLIP NAG.3: 3 residues within 4Å: Chain A: N.242, A.295, Y.297 Ligand excluded by PLIP NAG.4: 1 residues within 4Å: Chain A: N.285 Ligand excluded by PLIP NAG.5: 3 residues within 4Å: Chain A: N.415, T.417, F.444 Ligand excluded by PLIP NAG.6: 3 residues within 4Å: Chain A: V.470, N.472, N.522 Ligand excluded by PLIP NAG.7: 2 residues within 4Å: Chain A: N.526, T.528 Ligand excluded by PLIP NAG.8: 1 residues within 4Å: Chain A: N.578 Ligand excluded by PLIP NAG.9: 4 residues within 4Å: Chain A: Y.249, N.721, S.723, T.748 Ligand excluded by PLIP NAG.10: 4 residues within 4Å: Chain A: Q.753, Y.770, S.771, N.773 Ligand excluded by PLIP NAG.11: 2 residues within 4Å: Chain A: N.918, T.920 Ligand excluded by PLIP NAG.12: 4 residues within 4Å: Chain A: N.977, L.982, K.1038, Y.1039 Ligand excluded by PLIP NAG.13: 1 residues within 4Å: Chain A: N.1096 Ligand excluded by PLIP NAG.14: 1 residues within 4Å: Chain A: N.1266 Ligand excluded by PLIP NAG.15: 2 residues within 4Å: Chain A: E.1258, N.1286 Ligand excluded by PLIP NAG.16: 3 residues within 4Å: Chain A: D.910, N.1292, G.1293 Ligand excluded by PLIP NAG.17: 3 residues within 4Å: Chain A: L.1166, N.1348, E.1349 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arimura, Y. et al., Structural Mechanics of the Alpha-2-Macroglobulin Transformation. J.Mol.Biol. (2021)

Release Date

2022-01-05

Peptides

Alpha 2-macroglobulin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha 2-macroglobulin

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