SMTL ID : 7s7i.6 (5 other biounits)

Crystal structure of Fab in complex with MICA alpha3 domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: M.7, V.8, N.9 No protein-ligand interaction detected (PLIP) NAG.2: 4 residues within 4Å: Chain A: E.17, N.19, R.70 Chain B: R.56 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:E.17 Hydrogen bonds: A:N.19, B:R.56, B:R.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hogan, J.M. et al., Residue-Level Characterization of Antibody Binding Epitopes Using Carbene Chemical Footprinting. Anal.Chem. (2023)

Release Date

2022-10-05

Peptides

MHC class I chain-related protein A: A
Fab heavy chain: B
Fab light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

B
Y

C
Z

MHC class I chain-related protein A

Fab heavy chain

Fab light chain

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