SMTL ID : 7sgw.1

Papain-Like Protease of SARS CoV-2 in complex with PLP_Snyder630 inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x L30: N-(naphthalen-1-yl)pyridine-3-carboxamide(Non-covalent)

L30.1: 9 residues within 4Å: Chain A: L.165, G.166, D.167, M.211, P.250, Y.267, Y.271, Q.272, Y.276 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.271 Hydrogen bonds: A:D.167, A:D.167, A:Y.276

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.192, C.195, C.227, C.229 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.192, A:C.195, A:C.227, A:C.229

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: K.129, F.130, Q.136 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Osipiuk, J. et al., Papain-Like Protease of SARS CoV-2 in complex with PLP_Snyder630 inhibitor. To Be Published

Release Date

2021-10-20

Peptides

Non-structural protein 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Non-structural protein 3

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