SMTL ID : 7sid.1

Human ATM Dimer Bound to Nbs1

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-mer

Ligands

2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 15 residues within 4Å: Chain A: G.2694, P.2699, L.2715, K.2717, L.2767, E.2768, W.2769, C.2770, P.2775, Q.2874, L.2877, I.2888, D.2889, Y.2969 Ligands: MG.2 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.2768, A:C.2770, A:D.2889, A:Y.2969 Salt bridges: A:K.2717 pi-Stacking: A:W.2769 ANP.3: 15 residues within 4Å: Chain C: G.2694, P.2699, L.2715, K.2717, L.2767, E.2768, W.2769, C.2770, P.2775, Q.2874, L.2877, I.2888, D.2889, Y.2969 Ligands: MG.4 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:E.2768, C:C.2770, C:D.2889, C:Y.2969 Salt bridges: C:K.2717 pi-Stacking: C:W.2769

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: N.2875, D.2889 Ligands: ANP.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.2889 MG.4: 3 residues within 4Å: Chain C: N.2875, D.2889 Ligands: ANP.3 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:D.2889

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Warren, C. et al., Structure of the human ATM kinase and mechanism of Nbs1 binding. Elife (2022)

Release Date

2022-02-02

Peptides

Serine-protein kinase ATM: AC
Nibrin: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

Serine-protein kinase ATM

Nibrin

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