SMTL ID : 7slr.1

HIV Reverse Transcriptase with compound Pyr01

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.18 Å

Oligo State

homo-dimer

Ligands

1 x 9QI: 5-(difluoromethyl)-3-({1-[(5-fluoro-2-oxo-1,2-dihydropyridin-3-yl)methyl]-6-oxo-4-(1,1,2,2-tetrafluoroethyl)-1,6-dihydropyrimidin-5-yl}oxy)-2-methylbenzonitrile(Non-covalent)

9QI.1: 19 residues within 4Å: Chain A: P.96, L.101, K.102, K.103, K.104, V.107, V.109, V.180, Y.182, Y.189, V.190, G.191, P.226, F.228, W.230, L.235, H.236, P.237, Y.319 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.101, A:V.107, A:V.107, A:V.109, A:Y.189, A:F.228, A:L.235, A:Y.319 Hydrogen bonds: A:K.104, A:K.104 pi-Stacking: A:Y.189, A:W.230

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Balibar, C.J. et al., Potent targeted activator of cell kill molecules eliminate cells expressing HIV-1. Sci Transl Med (2023)

Release Date

2022-11-23

Peptides

Reverse transcriptase/ribonuclease H: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Reverse transcriptase/ribonuclease H

Related Entries With Identical Sequence