SMTL ID : 7sls.1

HIV Reverse Transcriptase with compound Pyr02

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.08 Å

Oligo State

homo-dimer

Ligands

1 x 9PJ: 5-(difluoromethyl)-3-{[1-{[(3S)-5-fluoro-2-methyl-6-oxo-3,6-dihydropyridin-3-yl]methyl}-6-oxo-4-(1,1,2,2-tetrafluoroethyl)-1,6-dihydropyrimidin-5-yl]oxy}-2-methylbenzonitrile(Non-covalent)

9PJ.1: 18 residues within 4Å: Chain A: P.96, L.101, K.102, K.104, V.107, V.109, V.180, Y.182, Y.189, V.190, G.191, P.226, F.228, W.230, L.235, H.236, P.237, Y.319 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.101, A:V.107, A:V.107, A:V.109, A:F.228, A:L.235, A:Y.319 Water bridges: A:K.102 pi-Stacking: A:Y.189, A:W.230

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Balibar, C.J. et al., Potent targeted activator of cell kill molecules eliminate cells expressing HIV-1. Sci Transl Med (2023)

Release Date

2022-11-23

Peptides

Reverse transcriptase/ribonuclease H: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Reverse transcriptase/ribonuclease H

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