SMTL ID : 7sme.1

p107 pocket domain complexed with HDAC1 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.64 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.9, S.161, R.162 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.162 Water bridges: A:R.9 Salt bridges: A:R.9 SO4.2: 6 residues within 4Å: Chain A: Y.55, R.73, L.123, S.128, P.129, R.130 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.55 Water bridges: A:R.130 Salt bridges: A:R.73, A:R.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Putta, S. et al., Structural basis for tunable affinity and specificity of LxCxE-dependent protein interactions with the retinoblastoma protein family. Structure (2022)

Release Date

2022-06-29

Peptides

Retinoblastoma-like protein 1: A
Histone deacetylase 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Retinoblastoma-like protein 1

Histone deacetylase 1

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