SMTL ID : 7svn.2 (1 other biounit)

DPP9 IN COMPLEX WITH LIGAND ICeD-1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.78 Å

Oligo State

homo-dimer

Ligands

2 x CW8: (2S,4S)-1-[(2S)-2-amino-2-cyclohexylacetyl]-4-fluoropyrrolidine-2-carbonitrile(Covalent)

CW8.1: 13 residues within 4Å: Chain A: R.133, E.248, E.249, Y.644, Q.648, S.730, Y.731, V.756, Y.762, Y.766, N.810, V.811, H.840 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.756, A:Y.762, A:V.811 Hydrogen bonds: A:R.133, A:E.248, A:E.248, A:S.730, A:Y.731, A:Y.762, A:N.810 CW8.2: 15 residues within 4Å: Chain B: R.133, E.248, E.249, H.500, Y.644, Q.648, S.730, Y.731, V.756, W.759, Y.762, Y.766, N.810, V.811, H.840 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:V.756, B:Y.762, B:V.811 Hydrogen bonds: B:R.133, B:E.248, B:E.248, B:Y.731, B:Y.762, B:N.810

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moore, K.P. et al., A Phenotypic Screen Identifies Potent DPP9 Inhibitors Capable of Killing HIV-1 Infected Cells. Acs Chem.Biol. (2022)

Release Date

2022-10-05

Peptides

Dipeptidyl peptidase 9: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Dipeptidyl peptidase 9

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