SMTL ID : 7t4v.2 (1 other biounit)

Crystal Structure of cGMP-dependent Protein Kinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.28 Å

Oligo State

monomer

Ligands

1 x EXZ: 4-({(2S,3S)-3-[(1S)-1-(3,5-dichlorophenyl)-2-hydroxyethoxy]-2-phenylpiperidin-1-yl}methyl)-3-methylbenzoic acid(Non-covalent)

EXZ.1: 18 residues within 4Å: Chain A: T.19, F.20, L.23, L.31, F.56, I.58, W.87, E.90, L.93, Q.94, I.114, F.119, Y.134, A.137, E.138, A.141, K.142, A.145 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.31, A:F.56, A:W.87, A:E.90, A:F.119, A:F.119, A:Y.134, A:A.137, A:E.138, A:K.142, A:K.142, A:A.145 Salt bridges: A:K.142

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: S.216, D.217, R.221 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Metwally, E. et al., Selective small molecule activation of PKG1alpha: structure and function. Commun Biol (2023)

Release Date

2023-06-14

Peptides

cGMP-dependent protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

cGMP-dependent protein kinase 1

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