SMTL ID : 7t9y.1

Co-crystal structure of SARS-CoV-2 Mpro C145A with substrate peptide 8/9

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.18 Å

Oligo State

hetero-2-2-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 2 residues within 4Å: Chain A: D.56, R.60 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.60 GOL.2: 5 residues within 4Å: Chain B: Q.74, L.75, R.76, D.92, T.93 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.76, B:D.92, B:T.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shaqra, A.M. et al., Defining the substrate envelope of SARS-CoV-2 main protease to predict and avoid drug resistance. Nat Commun (2022)

Release Date

2022-06-22

Peptides

3C-like proteinase: AB
Nonstructural protein 8/9: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

3C-like proteinase

Nonstructural protein 8/9

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