SMTL ID : 7ta7.1

Co-crystal structure of SARS-CoV-2 Mpro C145A with substrate peptide 10/11

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.28 Å

Oligo State

hetero-2-2-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 9 residues within 4Å: Chain A: P.108, G.109, P.132, I.200, V.202, E.240, H.246 Chain C: T.243, D.245 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:T.243, C:T.243 GOL.2: 8 residues within 4Å: Chain A: T.243, D.245 Chain C: P.108, P.132, I.200, V.202, E.240, H.246 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain A Hydrogen bonds: C:E.240, C:H.246, A:T.243

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shaqra, A.M. et al., Defining the substrate envelope of SARS-CoV-2 main protease to predict and avoid drug resistance. Nat Commun (2022)

Release Date

2022-06-22

Peptides

3C-like proteinase: AC
Nonstructural protein 10/11: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
B

B
C

D
D

3C-like proteinase

Nonstructural protein 10/11

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