- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 1 x GOL: GLYCEROL(Non-functional Binders)
- 16 x AZI: AZIDE ION(Non-covalent)
- 1 x MG: MAGNESIUM ION(Non-covalent)
- 1 x I5M: 5'-deoxy-5'-({(2S)-2-({2-[(N-{(2R)-4-[(dioxo-lambda~5~-phosphanyl)oxy]-2-hydroxy-3,3-dimethylbutanoyl}-beta-alanyl)amino]ethyl}sulfanyl)-2-[(2S)-pyrrolidin-2-yl]ethanesulfonyl}amino)adenosine(Covalent)
I5M.19: 37 residues within 4Å:- Chain A: H.181, A.182, F.186, D.187, L.188, Q.211, K.212, Y.230, V.232, S.234, I.235, M.238, A.259, G.260, E.261, P.262, N.283, W.284, Y.285, G.286, P.287, T.288, N.291, V.292, I.311, T.372, D.374, F.385, R.388, K.394, N.396, G.397, Y.398, R.399
- Chain B: S.36
- Ligands: MG.15, AZI.18
25 PLIP interactions:25 interactions with chain A- Hydrophobic interactions: A:L.188, A:K.212, A:I.235, A:A.259, A:V.292, A:Y.398
- Hydrogen bonds: A:G.260, A:W.284, A:G.286, A:G.286, A:T.288, A:T.288, A:R.388, A:K.394, A:N.396, A:N.396, A:G.397, A:R.399
- Water bridges: A:K.212, A:K.212, A:N.283, A:N.283, A:Y.398
- Salt bridges: A:K.212
- pi-Stacking: A:Y.285
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Corpuz, J.C. et al., Essential Role of Loop Dynamics in Type II NRPS Biomolecular Recognition. Acs Chem.Biol. (2022)
- Release Date
- 2022-11-30
- Peptides
- L-proline--[L-prolyl-carrier protein] ligase: A
Probable acyl carrier protein PigG: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
E
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 1 x GOL: GLYCEROL(Non-functional Binders)
- 16 x AZI: AZIDE ION(Non-covalent)
- 1 x MG: MAGNESIUM ION(Non-covalent)
- 1 x I5M: 5'-deoxy-5'-({(2S)-2-({2-[(N-{(2R)-4-[(dioxo-lambda~5~-phosphanyl)oxy]-2-hydroxy-3,3-dimethylbutanoyl}-beta-alanyl)amino]ethyl}sulfanyl)-2-[(2S)-pyrrolidin-2-yl]ethanesulfonyl}amino)adenosine(Covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Corpuz, J.C. et al., Essential Role of Loop Dynamics in Type II NRPS Biomolecular Recognition. Acs Chem.Biol. (2022)
- Release Date
- 2022-11-30
- Peptides
- L-proline--[L-prolyl-carrier protein] ligase: A
Probable acyl carrier protein PigG: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
E