- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 8 x AF3: ALUMINUM FLUORIDE(Non-covalent)
- 8 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 2 residues within 4Å:- Chain B: D.99
- Ligands: ADP.3
2 PLIP interactions:2 interactions with chain B- Metal complexes: B:D.99, B:D.99
MG.4: 3 residues within 4Å:- Chain C: D.92, K.166
- Ligands: ADP.5
1 PLIP interactions:1 interactions with chain C- Metal complexes: C:D.92
MG.7: 3 residues within 4Å:- Chain D: D.104
- Ligands: ADP.8, AF3.9
1 PLIP interactions:1 interactions with chain D- Metal complexes: D:D.104
MG.10: 3 residues within 4Å:- Chain E: D.97
- Ligands: ADP.11, AF3.12
1 PLIP interactions:1 interactions with chain E- Metal complexes: E:D.97
MG.13: 3 residues within 4Å:- Chain F: D.104
- Ligands: ADP.14, AF3.15
2 PLIP interactions:2 interactions with chain F- Metal complexes: F:D.104, F:D.104
MG.16: 3 residues within 4Å:- Chain G: D.88
- Ligands: ADP.17, AF3.18
2 PLIP interactions:2 interactions with chain G- Metal complexes: G:D.88, G:D.88
MG.19: 3 residues within 4Å:- Chain H: D.93
- Ligands: ADP.20, AF3.21
1 PLIP interactions:1 interactions with chain H- Metal complexes: H:D.93
MG.22: 4 residues within 4Å:- Chain I: D.90, D.393
- Ligands: ADP.23, AF3.24
1 PLIP interactions:1 interactions with chain I- Metal complexes: I:D.90
- 8 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.3: 13 residues within 4Å:- Chain B: Y.47, G.48, P.49, G.100, T.101, N.102, M.169, S.170, G.412, I.482, D.499
- Ligands: AF3.1, MG.2
10 PLIP interactions:10 interactions with chain B- Hydrogen bonds: B:A.46, B:Y.47, B:G.48, B:G.100, B:T.101, B:N.102, B:F.103, B:S.170, B:G.412, B:D.499
ADP.5: 17 residues within 4Å:- Chain C: T.39, L.40, G.41, D.92, G.93, T.94, T.95, S.96, T.161, S.164, S.165, K.166, G.409, V.502, R.509
- Ligands: MG.4, AF3.6
12 PLIP interactions:12 interactions with chain C- Hydrogen bonds: C:G.41, C:G.93, C:T.94, C:T.95, C:S.96, C:S.164, C:S.165, C:G.409, C:G.410, C:R.509
- Salt bridges: C:K.166, C:K.166
ADP.8: 16 residues within 4Å:- Chain D: L.52, G.53, D.104, G.105, T.106, T.107, G.108, T.171, S.175, G.422, C.493, V.506, E.508, K.513
- Ligands: MG.7, AF3.9
12 PLIP interactions:12 interactions with chain D- Hydrogen bonds: D:G.53, D:G.105, D:T.106, D:T.106, D:T.107, D:G.108, D:S.175, D:S.175, D:G.422, D:E.508, D:E.508, D:K.513
ADP.11: 18 residues within 4Å:- Chain E: T.42, L.43, G.44, P.45, D.97, G.98, T.99, T.100, S.101, T.165, S.168, S.169, G.410, M.480, I.493, E.495
- Ligands: MG.10, AF3.12
14 PLIP interactions:14 interactions with chain E- Hydrogen bonds: E:T.42, E:G.44, E:G.98, E:T.99, E:T.100, E:T.100, E:S.101, E:S.101, E:S.101, E:S.168, E:S.169, E:G.410, E:E.495, E:E.495
ADP.14: 17 residues within 4Å:- Chain F: L.52, G.53, P.54, D.104, G.105, T.106, T.107, S.108, T.169, N.172, S.173, G.424, G.425, I.493, Q.510
- Ligands: MG.13, AF3.15
11 PLIP interactions:11 interactions with chain F- Hydrogen bonds: F:G.53, F:G.105, F:T.106, F:T.107, F:S.108, F:S.108, F:S.108, F:N.172, F:S.173, F:G.425, F:Q.510
ADP.17: 16 residues within 4Å:- Chain G: S.35, L.36, G.37, P.38, D.88, G.89, T.90, T.91, S.92, T.154, S.158, K.159, G.412, L.488
- Ligands: MG.16, AF3.18
11 PLIP interactions:11 interactions with chain G- Hydrogen bonds: G:S.35, G:G.37, G:D.88, G:G.89, G:T.90, G:T.91, G:S.92, G:S.158, G:G.412, G:R.496
- Salt bridges: G:K.159
ADP.20: 17 residues within 4Å:- Chain H: C.40, L.41, D.93, G.94, T.95, T.96, S.97, T.161, T.162, G.410, G.411, L.451, V.480, G.482, I.495
- Ligands: MG.19, AF3.21
11 PLIP interactions:11 interactions with chain H- Hydrogen bonds: H:G.42, H:G.94, H:T.95, H:T.95, H:T.96, H:T.96, H:T.96, H:S.97, H:S.97, H:G.411, H:G.482
ADP.23: 18 residues within 4Å:- Chain I: N.37, L.38, G.39, P.40, D.90, G.91, T.92, T.93, S.94, T.154, T.158, G.410, A.411, L.481, D.496, K.501
- Ligands: MG.22, AF3.24
14 PLIP interactions:14 interactions with chain I- Hydrogen bonds: I:N.37, I:G.39, I:G.91, I:T.92, I:T.93, I:S.94, I:S.94, I:S.94, I:S.94, I:A.411, I:G.412, I:D.496, I:K.501
- Salt bridges: I:K.159
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gestaut, D. et al., Structural visualization of the tubulin folding pathway directed by human chaperonin TRiC/CCT. Cell (2022)
- Release Date
- 2022-12-28
- Peptides
- Tubulin beta chain: A
T-complex protein 1 subunit theta: B
T-complex protein 1 subunit eta: C
T-complex protein 1 subunit epsilon: D
T-complex protein 1 subunit beta: E
T-complex protein 1 subunit delta: F
T-complex protein 1 subunit alpha: G
T-complex protein 1 subunit gamma: H
T-complex protein 1 subunit zeta: I - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
I
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 8 x AF3: ALUMINUM FLUORIDE(Non-covalent)
- 8 x MG: MAGNESIUM ION(Non-covalent)
- 8 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gestaut, D. et al., Structural visualization of the tubulin folding pathway directed by human chaperonin TRiC/CCT. Cell (2022)
- Release Date
- 2022-12-28
- Peptides
- Tubulin beta chain: A
T-complex protein 1 subunit theta: B
T-complex protein 1 subunit eta: C
T-complex protein 1 subunit epsilon: D
T-complex protein 1 subunit beta: E
T-complex protein 1 subunit delta: F
T-complex protein 1 subunit alpha: G
T-complex protein 1 subunit gamma: H
T-complex protein 1 subunit zeta: I - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
I