- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 8 x MG: MAGNESIUM ION(Non-covalent)
- 8 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.2: 16 residues within 4Å:- Chain B: Y.47, G.48, P.49, D.99, G.100, T.101, N.102, F.103, T.166, M.169, S.170, G.412, I.482, I.497
- Ligands: MG.1, AF3.3
10 PLIP interactions:10 interactions with chain B- Hydrogen bonds: B:Y.47, B:G.48, B:G.100, B:G.100, B:T.101, B:T.101, B:N.102, B:F.103, B:S.170, B:G.412
ADP.5: 18 residues within 4Å:- Chain C: L.40, P.42, D.92, G.93, T.94, T.95, S.96, T.161, S.164, S.165, K.166, G.409, G.410, I.445, L.449, V.502
- Ligands: MG.4, AF3.6
10 PLIP interactions:10 interactions with chain C- Hydrogen bonds: C:G.93, C:G.93, C:T.94, C:T.95, C:S.96, C:S.164, C:S.165, C:G.409, C:G.410
- Salt bridges: C:K.166
ADP.8: 16 residues within 4Å:- Chain D: L.52, G.53, P.54, D.104, G.105, T.106, T.107, G.108, S.175, G.421, G.422, I.491, V.506, E.508
- Ligands: MG.7, AF3.9
10 PLIP interactions:10 interactions with chain D- Hydrogen bonds: D:S.51, D:G.53, D:D.104, D:G.105, D:T.106, D:T.107, D:G.108, D:S.175, D:G.422, D:E.508
ADP.11: 15 residues within 4Å:- Chain E: G.44, P.45, D.97, G.98, T.99, T.100, S.101, T.165, S.168, S.169, G.410, I.493, K.500
- Ligands: MG.10, AF3.12
15 PLIP interactions:15 interactions with chain E- Hydrogen bonds: E:G.44, E:D.97, E:G.98, E:G.98, E:T.99, E:T.99, E:T.100, E:T.100, E:S.101, E:S.168, E:S.169, E:S.169, E:G.410, E:K.500
- Salt bridges: E:K.170
ADP.14: 18 residues within 4Å:- Chain F: S.51, L.52, G.53, P.54, D.104, G.105, T.106, T.107, S.108, T.169, N.172, S.173, G.425, G.426, L.465, Q.510
- Ligands: MG.13, AF3.15
13 PLIP interactions:13 interactions with chain F- Hydrogen bonds: F:S.51, F:G.53, F:G.105, F:G.105, F:T.106, F:T.107, F:T.107, F:S.108, F:N.172, F:S.173, F:G.425, F:G.426, F:Q.510
ADP.17: 18 residues within 4Å:- Chain G: S.35, L.36, G.37, P.38, D.88, G.89, T.90, T.91, S.92, T.154, S.158, G.411, G.412, L.488, L.490, R.496
- Ligands: MG.16, AF3.18
11 PLIP interactions:11 interactions with chain G- Hydrogen bonds: G:S.35, G:G.37, G:G.89, G:T.90, G:T.91, G:T.91, G:S.92, G:S.158, G:G.412, G:G.413, G:R.496
ADP.20: 17 residues within 4Å:- Chain H: L.41, G.42, D.93, G.94, T.95, T.96, S.97, T.161, T.162, G.410, G.411, V.480, G.482, E.483, E.497
- Ligands: MG.19, AF3.21
9 PLIP interactions:9 interactions with chain H- Hydrogen bonds: H:G.42, H:G.94, H:T.95, H:T.96, H:T.96, H:S.97, H:G.411, H:G.482, H:E.483
ADP.23: 15 residues within 4Å:- Chain I: L.38, G.39, D.90, G.91, T.92, T.93, S.94, T.154, T.158, K.159, G.410, A.411, L.481
- Ligands: MG.22, AF3.24
11 PLIP interactions:11 interactions with chain I- Hydrogen bonds: I:G.39, I:G.91, I:T.92, I:T.93, I:T.93, I:S.94, I:S.94, I:T.158, I:A.411, I:G.412
- Salt bridges: I:K.159
- 8 x AF3: ALUMINUM FLUORIDE(Non-covalent)
AF3.3: 8 residues within 4Å:- Chain B: D.68, A.69, D.99, G.100, T.101, K.171, D.394
- Ligands: ADP.2
No protein-ligand interaction detected (PLIP)AF3.6: 11 residues within 4Å:- Chain C: N.60, D.61, G.62, D.92, G.93, T.94, T.95, K.166, D.391
- Ligands: MG.4, ADP.5
No protein-ligand interaction detected (PLIP)AF3.9: 9 residues within 4Å:- Chain D: D.73, D.104, G.105, T.106, T.107, K.176, D.404
- Ligands: MG.7, ADP.8
No protein-ligand interaction detected (PLIP)AF3.12: 8 residues within 4Å:- Chain E: N.65, D.66, G.67, T.99, T.100, K.170, D.392
- Ligands: ADP.11
1 PLIP interactions:1 interactions with chain E- Metal complexes: E:D.66
AF3.15: 8 residues within 4Å:- Chain F: D.73, G.74, D.104, T.106, K.174, D.407
- Ligands: MG.13, ADP.14
No protein-ligand interaction detected (PLIP)AF3.18: 9 residues within 4Å:- Chain G: D.57, G.58, D.88, T.90, T.91, K.159, D.394
- Ligands: MG.16, ADP.17
No protein-ligand interaction detected (PLIP)AF3.21: 8 residues within 4Å:- Chain H: D.62, G.63, G.94, T.95, T.96, K.163, D.393
- Ligands: ADP.20
No protein-ligand interaction detected (PLIP)AF3.24: 11 residues within 4Å:- Chain I: K.58, D.59, G.60, D.90, G.91, T.92, T.93, K.159, D.393
- Ligands: MG.22, ADP.23
1 PLIP interactions:1 interactions with chain I- Metal complexes: I:D.59
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gestaut, D. et al., Structural visualization of the tubulin folding pathway directed by human chaperonin TRiC/CCT. Cell (2022)
- Release Date
- 2022-12-28
- Peptides
- Tubulin beta chain: A
T-complex protein 1 subunit theta: B
T-complex protein 1 subunit eta: C
T-complex protein 1 subunit epsilon: D
T-complex protein 1 subunit beta: E
T-complex protein 1 subunit delta: F
T-complex protein 1 subunit alpha: G
T-complex protein 1 subunit gamma: H
T-complex protein 1 subunit zeta: I - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
I
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 8 x MG: MAGNESIUM ION(Non-covalent)
- 8 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 8 x AF3: ALUMINUM FLUORIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gestaut, D. et al., Structural visualization of the tubulin folding pathway directed by human chaperonin TRiC/CCT. Cell (2022)
- Release Date
- 2022-12-28
- Peptides
- Tubulin beta chain: A
T-complex protein 1 subunit theta: B
T-complex protein 1 subunit eta: C
T-complex protein 1 subunit epsilon: D
T-complex protein 1 subunit beta: E
T-complex protein 1 subunit delta: F
T-complex protein 1 subunit alpha: G
T-complex protein 1 subunit gamma: H
T-complex protein 1 subunit zeta: I - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
I