SMTL ID : 7ufo.1

Structure of PfCSP peptide 21 with antibody P3-42

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 14 residues within 4Å: Chain A: L.149, F.174, P.175, A.176, V.177, S.185, L.186, S.187 Chain B: Q.166, E.167, S.168, S.182, S.183, T.184 7 PLIP interactions: 4 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:S.168, B:S.182, B:T.184, B:T.184, A:P.175, A:S.187, A:S.187 GOL.4: 8 residues within 4Å: Chain A: V.171, H.172, T.173 Chain B: T.170, E.171, Q.172, D.173, T.178 6 PLIP interactions: 2 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:H.172, B:T.170, B:E.171, B:E.171 Water bridges: A:T.173, B:D.173

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: Q.179, S.180, S.181 Chain B: T.186 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.179, A:S.180, A:S.181 Water bridges: A:K.151, A:S.181 SO4.3: 2 residues within 4Å: Chain A: P.210, N.212 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:P.210, A:N.212

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tripathi, P. et al., Structure of PfCSP peptide 21 with antibody P3-42. To Be Published

Release Date

2023-04-12

Peptides

P3-42 Fab Heavy chain: A
P3-42 Fab Light chain: B
PfCSP peptide 21: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
A

P3-42 Fab Heavy chain

P3-42 Fab Light chain

PfCSP peptide 21

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