SMTL ID : 7uj3.1

Crystal structure of Human respiratory syncytial virus F variant (construct pXCS847A)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.50 Å

Oligo State

hetero-1-1-mer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain B: F.1, R.203, Q.218 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:F.1, B:Q.218 Salt bridges: B:R.203 SO4.3: 6 residues within 4Å: Chain B: S.307, N.308, K.309, G.328, K.329, S.330 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.307, B:S.330 SO4.4: 3 residues within 4Å: Chain B: L.57, D.58, K.90 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:L.57, B:D.58 Salt bridges: B:K.90

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 1 residues within 4Å: Chain B: N.364 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Che, Y. et al., Rational design of a highly immunogenic prefusion-stabilized F glycoprotein antigen for a respiratory syncytial virus vaccine. Sci Transl Med (2023)

Release Date

2023-04-19

Peptides

RSV variant (construct pXCS847A) F2: A
RSV variant (construct pXCS847A) F1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

RSV variant (construct pXCS847A) F2

RSV variant (construct pXCS847A) F1

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