SMTL ID : 7ust.1

Plasmodium falciparum protein Pfs230 D1 in complex with nanobody F5

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-1-1-mer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: F.27, Y.32, R.98 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.32 Salt bridges: A:R.98 SO4.2: 3 residues within 4Å: Chain B: K.78, L.79, K.82 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:L.79 Water bridges: B:L.79 Salt bridges: B:K.78, B:K.82 SO4.3: 5 residues within 4Å: Chain B: E.7, K.38, K.40, N.94, E.106 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:N.94, B:E.106 Water bridges: B:K.38, B:K.38 Salt bridges: B:K.38, B:K.40

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dietrich, M.H. et al., Nanobodies against Pfs230 block Plasmodium falciparum transmission. Biochem.J. (2022)

Release Date

2022-12-28

Peptides

Nanobody F5: A
Gametocyte surface protein P230: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Nanobody F5

Gametocyte surface protein P230

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