SMTL ID : 7uzq.1

Local refinement of RhAG-RhCE-ANK1(AR1-5), from consensus refinement of all classes

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-2-1-mer

Ligands

2 x CLR: CHOLESTEROL(Non-covalent)

CLR.1: 16 residues within 4Å: Chain B: C.286, A.290, I.291, H.292, F.294, G.295, I.298, I.299, I.302, V.340, L.343, A.344, V.347, A.348, M.351, A.353 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:I.291, B:F.294, B:I.298, B:I.302, B:V.340, B:L.343, B:A.344, B:A.348 CLR.2: 13 residues within 4Å: Chain B: Y.180, L.183, A.184, G.187, I.188, Y.190, F.318, L.322, R.323, I.324, V.373, L.377, K.384 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:L.183, B:L.183, B:I.188, B:R.323, B:I.324, B:I.324, B:V.373, B:V.373, B:L.377

2 x AJP: Digitonin(Non-covalent)

AJP.3: 17 residues within 4Å: Chain B: Y.26 Chain C: C.286, A.290, I.291, H.292, F.294, G.295, I.298, I.299, I.302, V.340, L.343, A.344, V.347, A.348, M.351, A.353 12 PLIP interactions: 12 interactions with chain C Hydrophobic interactions: C:I.291, C:I.291, C:F.294, C:I.298, C:I.299, C:I.302, C:V.340, C:L.343, C:V.347, C:A.348, C:M.351, C:A.353 AJP.4: 15 residues within 4Å: Chain C: Y.180, L.183, A.184, G.187, I.188, Y.190, R.191, S.192, F.318, L.322, R.323, I.324, V.373, L.377, K.384 9 PLIP interactions: 9 interactions with chain C Hydrophobic interactions: C:Y.180, C:L.183, C:I.188, C:Y.190, C:R.323, C:V.373, C:L.377 Hydrogen bonds: C:Y.190, C:S.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vallese, F. et al., Architecture of the human erythrocyte ankyrin-1 complex. Nat.Struct.Mol.Biol. (2022)

Release Date

2022-07-20

Peptides

Blood group Rh(CE) polypeptide: A
Ammonium transporter Rh type A: BC
Ankyrin-1: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
K

B
L

C
Q

D
J

Membrane

We predict this structure to be a membrane protein.
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Blood group Rh(CE) polypeptide

Ammonium transporter Rh type A

Ankyrin-1

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