SMTL ID : 7v10.1

Factor XIa in Complex with Compound 2d

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x OQI: methyl ~{N}-[4-[1-[(1~{R})-1-[5-[3-chloranyl-2-fluoranyl-6-(1,2,3,4-tetrazol-1-yl)phenyl]-1-oxidanyl-pyridin-2-yl]-2-cyclopropyl-ethyl]pyrazol-4-yl]phenyl]carbamate(Non-covalent)

OQI.1: 26 residues within 4Å: Chain A: R.26, H.27, L.28, C.29, H.44, C.45, Y.134, L.137, I.141, D.182, A.183, C.184, K.185, G.186, D.187, S.188, T.206, S.207, W.208, G.209, E.210, G.211, C.212, G.219, V.220, Y.221 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.141, A:K.185 Hydrogen bonds: A:R.26, A:H.27, A:G.186, A:D.187, A:S.188 Water bridges: A:H.27, A:G.209, A:G.211

1 x CIT: CITRIC ACID(Non-functional Binders)

CIT.2: 7 residues within 4Å: Chain A: E.11, W.12, D.126, W.128, K.147, K.195, W.200 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:W.12, A:W.128, A:W.200 Salt bridges: A:K.147, A:K.195, A:K.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, G. et al., Discovery of Potent and Orally Bioavailable Pyridine N-Oxide-Based Factor XIa Inhibitors through Exploiting Nonclassical Interactions. J.Med.Chem. (2022)

Release Date

2022-08-03

Peptides

Coagulation factor XIa light chain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Coagulation factor XIa light chain

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