SMTL ID : 7v17.1

Factor XIa in Complex with Compound 2k

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.52 Å

Oligo State

monomer

Ligands

1 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 4 residues within 4Å: Chain A: Q.84, Y.92, H.169, K.170 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Q.84, A:Y.92, A:K.170 Salt bridges: A:H.169, A:H.169, A:K.170, A:K.170, A:K.170

1 x OTL: 5-[3-chloranyl-2-fluoranyl-6-(1,2,3,4-tetrazol-1-yl)phenyl]-2-[(1~{R})-2-cyclopropyl-1-[4-(3-methylimidazol-4-yl)pyrazol-1-yl]ethyl]-1-oxidanyl-pyridine(Non-covalent)

OTL.2: 22 residues within 4Å: Chain A: H.27, L.28, C.29, H.44, Y.134, I.141, D.182, A.183, C.184, K.185, G.186, D.187, S.188, T.206, S.207, W.208, G.209, G.211, C.212, G.219, V.220, Y.221 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:K.185 Hydrogen bonds: A:Y.134, A:K.185, A:G.186, A:D.187, A:S.188 Water bridges: A:G.209, A:G.211

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, G. et al., Discovery of Potent and Orally Bioavailable Pyridine N-Oxide-Based Factor XIa Inhibitors through Exploiting Nonclassical Interactions. J.Med.Chem. (2022)

Release Date

2022-08-03

Peptides

Coagulation factor XIa light chain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Coagulation factor XIa light chain

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