SMTL ID : 7v63.1

Structure of dimeric uPAR at low pH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.91 Å

Oligo State

homo-dimer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: T.61, N.174, T.176 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.176 NAG.2: 4 residues within 4Å: Chain B: T.61, N.174, T.176, K.177 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:T.61 NAG.3: 3 residues within 4Å: Chain B: N.202, T.204, H.205 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:T.204 Hydrogen bonds: B:N.202, B:T.204, B:T.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yu, S. et al., Crystal structure and cellular functions of uPAR dimer. Nat Commun (2022)

Release Date

2021-12-22

Peptides

Urokinase plasminogen activator surface receptor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Urokinase plasminogen activator surface receptor

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