SMTL ID : 7vds.2 (1 other biounit)

The structure of cyclin-dependent kinase 5 (CDK5) in complex with p25 and Compound 24

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.05 Å

Oligo State

hetero-1-1-mer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 2 residues within 4Å: Chain A: K.89, D.92 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.92, A:D.92 EDO.2: 5 residues within 4Å: Chain A: L.147, E.161, V.163, R.168 Ligands: EDO.3 No protein-ligand interaction detected (PLIP) EDO.3: 4 residues within 4Å: Chain A: T.164, L.165, R.168 Ligands: EDO.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.165, A:R.168

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Daniels, M.H. et al., Discovery and Optimization of Highly Selective Inhibitors of CDK5. J.Med.Chem. (2022)

Release Date

2022-03-09

Peptides

Cyclin-dependent-like kinase 5, p25: A
Cyclin-dependent kinase 5 activator 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Cyclin-dependent-like kinase 5, p25

Cyclin-dependent kinase 5 activator 1

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