SMTL ID : 7vkd.1

Reduced enzyme of FAD-dpendent Glucose Dehydrogenase at pH6.5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.58 Å

Oligo State

monomer

Ligands

1 x FDA: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE(Non-covalent)

FDA.1: 37 residues within 4Å: Chain A: G.13, G.14, G.15, T.16, S.17, L.36, E.37, A.38, Y.54, F.58, W.64, R.82, G.84, K.85, A.86, G.89, T.90, S.91, I.93, N.94, G.95, M.96, A.97, T.234, T.235, A.236, S.275, A.276, G.277, R.280, F.505, D.538, A.539, H.549, L.550, V.551, L.554 31 PLIP interactions: 31 interactions with chain A Hydrophobic interactions: A:F.58, A:T.90, A:F.505, A:F.505 Hydrogen bonds: A:G.14, A:T.16, A:T.16, A:S.17, A:A.38, A:G.84, A:A.86, A:T.90, A:T.90, A:T.90, A:N.94, A:G.95, A:A.97, A:A.97, A:A.236, A:A.236, A:A.539, A:H.549, A:L.550, A:V.551 Water bridges: A:G.15, A:G.18, A:Y.54, A:A.278, A:A.278, A:F.505, A:S.552

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nakajima, Y., Conformational change of catalytic residue in reduced enzyme of FAD-dependent Glucose Dehydrogenase at pH6.5. To Be Published

Release Date

2022-10-05

Peptides

GMC oxidoreductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GMC oxidoreductase

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