SMTL ID : 7w33.1

The crystal structure of human CtsL in complex with 14a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.39 Å

Oligo State

monomer

Ligands

1 x 89B: N-[(2S)-3-(4-fluorophenyl)-1-oxidanylidene-1-[[(2R,3S)-3-oxidanyl-4-oxidanylidene-1-[(3S)-2-oxidanylidenepiperidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-1-benzofuran-2-carboxamide(Covalent)

89B.1: 21 residues within 4Å: Chain A: Q.132, Q.134, C.135, G.136, S.137, C.138, W.139, G.174, E.176, C.178, N.179, G.180, G.181, L.182, M.183, A.248, M.274, D.275, H.276, G.277, A.327 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.182, A:L.182 Hydrogen bonds: A:Q.132, A:S.137, A:C.138, A:G.181, A:G.181, A:D.275 Water bridges: A:D.275

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xie, X. et al., Structure-based design of pan-coronavirus inhibitors targeting host cathepsin L and calpain-1. Signal Transduct Target Ther (2024)

Release Date

2023-05-31

Peptides

Procathepsin L: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Procathepsin L

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