SMTL ID : 8gx2.1 (1 other biounit)

The crystal structure of human CtsL in complex with 14c

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 3 residues within 4Å: Chain A: H.253, E.254, S.255 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.254, A:S.255 Water bridges: A:S.255 DMS.3: 4 residues within 4Å: Chain A: N.131, G.303, E.304, E.305 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.304 Salt bridges: A:E.305

1 x KJ0: N-[(2S)-3-cyclohexyl-1-[[(2S,3S)-4-(cyclopropylamino)-3-oxidanyl-4-oxidanylidene-1-[(3S)-2-oxidanylidenepiperidin-3-yl]butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-benzofuran-2-carboxamide(Covalent)

KJ0.2: 19 residues within 4Å: Chain A: Q.132, C.135, G.136, S.137, C.138, W.139, G.174, E.176, C.178, N.179, G.180, G.181, L.182, M.183, Y.185, A.248, D.275, H.276, A.327 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:E.176, A:Y.185, A:A.248, A:A.327 Hydrogen bonds: A:Q.132, A:C.138, A:G.181, A:G.181, A:D.275, A:H.276 Water bridges: A:D.275, A:D.275

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, Y. et al., The crystal structure of human CtsL in complex with 14a. To Be Published

Release Date

2023-09-20

Peptides

Procathepsin L: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Procathepsin L

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