SMTL ID : 7w6r.1

Structure of Bat coronavirus RaTG13 spike receptor-binding domain complexed with its receptor equine ACE2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.356, E.357, H.360, E.384 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.356, A:H.360, A:E.384, A:E.384

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 5 residues within 4Å: Chain B: F.20, G.21, F.24, N.25, L.50 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:F.24, B:L.50 Hydrogen bonds: B:N.25, B:N.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, Z. et al., Binding and structural basis of equine ACE2 to RBDs from SARS-CoV, SARS-CoV-2 and related coronaviruses. Nat Commun (2022)

Release Date

2022-06-08

Peptides

Angiotensin-converting enzyme: A
Spike glycoprotein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Angiotensin-converting enzyme

Spike glycoprotein

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