SMTL ID : 7wg5.1

Cyclic electron transport supercomplex NDH-PSI from Arabidopsis

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
284 x CLA: CHLOROPHYLL A(Non-covalent)(Covalent)
4 x PQN: PHYLLOQUINONE(Non-covalent)
19 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
51 x BCR: BETA-CAROTENE(Non-covalent)
9 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
8 x LMU: DODECYL-ALPHA-D-MALTOSIDE(Non-covalent)(Non-functional Binders)
2 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
9 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
4 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
22 x CHL: CHLOROPHYLL B(Non-covalent)(Covalent)
8 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
2 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
1 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Su, X. et al., Supramolecular assembly of chloroplast NADH dehydrogenase-like complex with photosystem I from Arabidopsis thaliana. Mol Plant (2022)
Release Date
2022-03-16
Peptides
Photosystem I P700 chlorophyll a apoprotein A1: AQ
Photosystem I P700 chlorophyll a apoprotein A2: BR
Photosystem I iron-sulfur center: CS
Photosystem I reaction center subunit II-2, chloroplastic: DT
Photosystem I reaction center subunit IV A, chloroplastic: EU
Photosystem I reaction center subunit III, chloroplastic: FV
Photosystem I reaction center subunit V, chloroplastic: GW
Photosystem I reaction center subunit VI-2, chloroplastic: HX
Photosystem I reaction center subunit VIII: IY
Photosystem I reaction center subunit IX: JZ
Photosystem I reaction center subunit psaK, chloroplastic: K0
Photosystem I reaction center subunit XI, chloroplastic: L1
Chlorophyll a-b binding protein 6, chloroplastic: M2
Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic: N4
Chlorophyll a-b binding protein 4, chloroplastic: O
Photosystem I chlorophyll a/b-binding protein 6, chloroplastic: P
Photosystem I chlorophyll a/b-binding protein 2, chloroplastic: 3
Photosystem I chlorophyll a/b-binding protein 5, chloroplastic: 5
NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic: 6
NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic: 7
NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic: 8
NAD(P)H-quinone oxidoreductase chain 4, chloroplastic: 9
NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic: a
NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic: b
NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic: c
Photosynthetic NDH subunit of subcomplex B 1, chloroplastic: d
Photosynthetic NDH subunit of subcomplex B 2, chloroplastic: e
Photosynthetic NDH subunit of subcomplex B 3, chloroplastic: f
NDH dependent flow 6: g
Photosynthetic NDH subunit of subcomplex B 5, chloroplastic: h
Photosynthetic NDH subunit of lumenal location 1, chloroplastic: i
Photosynthetic NDH subunit of lumenal location 2, chloroplastic: j
Photosynthetic NDH subunit of lumenal location 3, chloroplastic: k
Photosynthetic NDH subunit of lumenal location 4, chloroplastic: l
Isoform 2 of Photosynthetic NDH subunit of lumenal location 5, chloroplastic: m
NAD(P)H-quinone oxidoreductase subunit H, chloroplastic: n
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic: o
NAD(P)H-quinone oxidoreductase subunit J, chloroplastic: p
NAD(P)H-quinone oxidoreductase subunit K, chloroplastic: q
NAD(P)H-quinone oxidoreductase subunit L, chloroplastic: r
NAD(P)H-quinone oxidoreductase subunit M, chloroplastic: s
NAD(P)H-quinone oxidoreductase subunit N, chloroplastic: t
NdhO: u
NdhT: v
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
AA
Q
BA
B
AB
R
BB
C
AC
S
BC
D
AD
T
BD
E
AE
U
BE
F
AF
V
BF
G
AG
W
BG
H
AH
X
BH
I
AI
Y
BI
J
AJ
Z
BJ
K
AK
0
BK
L
AL
1
BL
M
A1
2
B1
N
A3
4
B3
O
A4
P
A6
3
B2
5
B5
6
A
7
B
8
C
9
D
a
E
b
F
c
G
d
a
e
b
f
c
g
d
h
e
i
f
j
g
k
h
l
i
m
j
n
H
o
I
p
J
q
K
r
L
s
M
t
N
u
O
v
T
Membrane
We predict this structure to be a membrane protein.

Photosystem I P700 chlorophyll a apoprotein A1

Toggle Identical (AQ)

Photosystem I P700 chlorophyll a apoprotein A2

Photosystem I iron-sulfur center

Toggle Identical (CS)

Photosystem I reaction center subunit II-2, chloroplastic

Photosystem I reaction center subunit IV A, chloroplastic

Photosystem I reaction center subunit III, chloroplastic

Photosystem I reaction center subunit V, chloroplastic

Photosystem I reaction center subunit VI-2, chloroplastic

Toggle Identical (HX)

Photosystem I reaction center subunit VIII

Toggle Identical (IY)

Photosystem I reaction center subunit IX

Photosystem I reaction center subunit psaK, chloroplastic

Photosystem I reaction center subunit XI, chloroplastic

Chlorophyll a-b binding protein 6, chloroplastic

Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic

Chlorophyll a-b binding protein 4, chloroplastic

Photosystem I chlorophyll a/b-binding protein 6, chloroplastic

Photosystem I chlorophyll a/b-binding protein 2, chloroplastic

Photosystem I chlorophyll a/b-binding protein 5, chloroplastic

NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic

NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

NAD(P)H-quinone oxidoreductase chain 4, chloroplastic

NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic

NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic

Photosynthetic NDH subunit of subcomplex B 1, chloroplastic

Photosynthetic NDH subunit of subcomplex B 2, chloroplastic

Photosynthetic NDH subunit of subcomplex B 3, chloroplastic

NDH dependent flow 6

Photosynthetic NDH subunit of subcomplex B 5, chloroplastic

Photosynthetic NDH subunit of lumenal location 1, chloroplastic

Photosynthetic NDH subunit of lumenal location 2, chloroplastic

Photosynthetic NDH subunit of lumenal location 3, chloroplastic

Photosynthetic NDH subunit of lumenal location 4, chloroplastic

Isoform 2 of Photosynthetic NDH subunit of lumenal location 5, chloroplastic

NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

NAD(P)H-quinone oxidoreductase subunit L, chloroplastic

NAD(P)H-quinone oxidoreductase subunit M, chloroplastic

NAD(P)H-quinone oxidoreductase subunit N, chloroplastic

NdhO

NdhT

Related Entries With Identical Sequence

2wsc.1 | 2wse.1 | 2wsf.1 | 6ana.1 | 7sb3.1 | 7wfd.1 | 7wfe.1 | 7wff.1 | 7wfg.1 | 8j6z.1 | 8j7a.1 | 8j7b.1 | 8swv.1 | 8wgh.1