SMTL ID : 8j6z.1

Cryo-EM structure of the Arabidopsis thaliana photosystem I(PSI-LHCII-ST2)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-2-1-mer
Ligands
30 x CHL: CHLOROPHYLL B(Non-covalent)
168 x CLA: CHLOROPHYLL A(Non-covalent)(Non-functional Binders)
6 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
9 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
11 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
27 x BCR: BETA-CAROTENE(Non-covalent)
2 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
1 x CL0: CHLOROPHYLL A ISOMER(Non-covalent)
3 x SF4: IRON/SULFUR CLUSTER(Covalent)
2 x PQN: PHYLLOQUINONE(Non-covalent)
1 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
3 x NEX: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Wu, J. et al., Regulatory dynamics of the higher-plant PSI-LHCI supercomplex during state transitions. Mol Plant (2023)
Release Date
2023-11-15
Peptides
Chlorophyll a-b binding protein 6, chloroplastic: A
Photosystem I chlorophyll a/b-binding protein 2, chloroplastic: B
Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic: C
Chlorophyll a-b binding protein 4, chloroplastic: D
Photosystem I P700 chlorophyll a apoprotein A1: E
Photosystem I P700 chlorophyll a apoprotein A2: F
Photosystem I iron-sulfur center: G
Photosystem I reaction center subunit II-2, chloroplastic: H
Photosystem I reaction center subunit IV A, chloroplastic: I
Photosystem I reaction center subunit III, chloroplastic: J
Photosystem I reaction center subunit V, chloroplastic: K
Photosystem I reaction center subunit VI-2, chloroplastic: L
Photosystem I reaction center subunit VIII: M
Photosystem I reaction center subunit IX: N
Photosystem I reaction center subunit psaK, chloroplastic: O
Photosystem I reaction center subunit XI, chloroplastic: P
Photosystem I subunit O: Q
Chlorophyll a-b binding protein 2, chloroplastic: RS
Chlorophyll a-b binding protein 2.1, chloroplastic: T
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
1
B
2
C
3
D
4
E
A
F
B
G
C
H
D
I
E
J
F
K
G
L
H
M
I
N
J
O
K
P
L
Q
O
R
x
S
y
T
z
Membrane
We predict this structure to be a membrane protein.

Chlorophyll a-b binding protein 6, chloroplastic

Photosystem I chlorophyll a/b-binding protein 2, chloroplastic

Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic

Chlorophyll a-b binding protein 4, chloroplastic

Photosystem I P700 chlorophyll a apoprotein A1

Photosystem I P700 chlorophyll a apoprotein A2

Photosystem I iron-sulfur center

Photosystem I reaction center subunit II-2, chloroplastic

Photosystem I reaction center subunit IV A, chloroplastic

Photosystem I reaction center subunit III, chloroplastic

Photosystem I reaction center subunit V, chloroplastic

Photosystem I reaction center subunit VI-2, chloroplastic

Photosystem I reaction center subunit VIII

Photosystem I reaction center subunit IX

Photosystem I reaction center subunit psaK, chloroplastic

Photosystem I reaction center subunit XI, chloroplastic

Photosystem I subunit O

Chlorophyll a-b binding protein 2, chloroplastic

Toggle Identical (RS)

Chlorophyll a-b binding protein 2.1, chloroplastic

Related Entries With Identical Sequence

2wsc.1 | 2wse.1 | 2wsf.1 | 7wfd.1 | 7wfe.1 | 7wg5.1 | 8j7a.1 | 8j7b.1 | 8wgh.1