SMTL ID : 7wnp.1

Crystallographic structure of copper amine oxidase from Arthrobacter glibiformis at pD 7.4 determined by both X-ray and neutron diffraction data at 1.72 angstrom resolution.

Coordinates

PDB Format Compare

Method

NEUTRON DIFFRACTION 1.72 Å

Oligo State

homo-dimer

Ligands

2 x CU: COPPER (II) ION(Non-covalent)

CU.1: 3 residues within 4Å: Chain A: H.423, H.425, H.584 7 PLIP interactions: 3 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:H.423, A:H.425, A:H.584, H2O.15, H2O.15, H2O.21, H2O.21 CU.3: 3 residues within 4Å: Chain B: H.423, H.425, H.584 7 PLIP interactions: 3 interactions with chain B, 4 Ligand-Water interactions Metal complexes: B:H.423, B:H.425, B:H.584, H2O.51, H2O.51, H2O.58, H2O.58

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 7 residues within 4Å: Chain A: R.41, D.432, M.433, F.438, Y.538, D.573, I.574 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:M.433, A:I.574, A:I.574 NA.4: 7 residues within 4Å: Chain B: R.41, D.432, M.433, F.438, Y.538, D.573, I.574 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:M.433, B:D.573, B:I.574

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Murakawa, T. et al., Re-evaluation of protein neutron crystallography with and without X-ray/neutron joint refinement. Iucrj (2022)

Release Date

2022-04-20

Peptides

Phenylethylamine oxidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

B
X

Phenylethylamine oxidase

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