SMTL ID : 7xkp.1

F1 domain of epsilon C-terminal domain deleted FoF1 from Bacillus PS3,state1,unisite condition

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-3-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain F: T.176, E.201, R.202 Ligands: ADP.2 2 PLIP interactions: 2 interactions with chain F Metal complexes: F:T.176, F:E.201

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 14 residues within 4Å: Chain B: V.363, R.365 Chain F: G.170, A.171, G.172, V.173, G.174, K.175, T.176, V.177, R.202, Y.352, F.425 Ligands: MG.1 13 PLIP interactions: 10 interactions with chain F, 3 interactions with chain B Hydrogen bonds: F:G.172, F:V.173, F:G.174, F:K.175, F:T.176, F:T.176, F:V.177, F:R.202, B:R.365 Salt bridges: F:K.175, B:R.365, B:R.365 pi-Stacking: F:Y.352

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nakano, A. et al., Structural basis of unisite catalysis of bacterial F 0 F 1 -ATPase. Pnas Nexus (2022)

Release Date

2022-09-21

Peptides

ATP synthase subunit alpha: ABC
ATP synthase subunit beta: DEF
ATP synthase gamma chain: G

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

ATP synthase subunit alpha

ATP synthase subunit beta

ATP synthase gamma chain

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