SMTL ID : 7ycl.2 (1 other biounit)

Crystal structure of SARS-CoV-2 Spike RBD in complex with IS-9A Fab

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.13 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-FUC.1: 6 residues within 4Å: Chain C: N.11, A.12, T.13, N.108, L.109, R.177 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:N.108

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, K.A. et al., Structural basis for a conserved neutralization epitope on the receptor-binding domain of SARS-CoV-2. Nat Commun (2023)

Release Date

2023-02-01

Peptides

IS-9A Fab light chain: A
IS-9A Fab heavy chain: B
Spike protein S1: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

C
D

IS-9A Fab light chain

IS-9A Fab heavy chain

Spike protein S1

Related Entries With Identical Sequence