SMTL ID : 7yxn.1 (1 other biounit)

Crystal structure of WT AncGR2-LBD bound to dexamethasone and SHP coregulator fragment

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.46 Å

Oligo State

hetero-1-1-mer

Ligands

1 x DEX: DEXAMETHASONE(Non-covalent)

DEX.1: 17 residues within 4Å: Chain A: M.34, L.37, N.38, G.41, Q.44, W.74, M.75, M.78, A.79, R.85, F.97, Q.116, M.120, C.210, T.213, V.221, F.223 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.37, A:W.74, A:M.78, A:Q.116 Hydrogen bonds: A:N.38, A:Q.44, A:R.85

2 x FMT: FORMIC ACID(Non-functional Binders)

FMT.2: 2 residues within 4Å: Chain A: K.88, Y.134 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.88, A:Y.134 FMT.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jimenez-Panizo, A. et al., The multivalency of the glucocorticoid receptor ligand-binding domain explains its manifold physiological activities. Nucleic Acids Res. (2022)

Release Date

2022-12-07

Peptides

Ancestral Glucocorticoid Receptor2: A
SHP NR Box 1 Peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
R

Ancestral Glucocorticoid Receptor2

SHP NR Box 1 Peptide

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