SMTL ID : 7yxo.2 (2 other biounits)

Crystal structure of WT AncGR2-LBD bound to dexamethasone and SHP coregulator fragment

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.99 Å

Oligo State

hetero-1-1-mer

Ligands

1 x DEX: DEXAMETHASONE(Non-covalent)

DEX.1: 15 residues within 4Å: Chain A: L.35, N.36, G.39, Q.42, M.73, M.76, R.83, F.95, Q.114, M.118, L.204, F.207, C.208, T.211, F.221 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.95, A:Q.114, A:L.204 Hydrogen bonds: A:L.35, A:N.36, A:Q.42, A:R.83, A:T.211

1 x CPS: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE(Non-covalent)

CPS.2: 4 residues within 4Å: Chain A: D.159, M.163, W.184, F.187 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:D.159

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain A: E.14, S.45, K.48 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.14, A:S.45 Salt bridges: A:K.48 SO4.4: 1 residues within 4Å: Chain A: R.57 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.57

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jimenez-Panizo, A. et al., The multivalency of the glucocorticoid receptor ligand-binding domain explains its manifold physiological activities. Nucleic Acids Res. (2022)

Release Date

2022-12-07

Peptides

Ancestral Glucocorticoid Receptor2: A
SHP NR Box 1 Peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Ancestral Glucocorticoid Receptor2

SHP NR Box 1 Peptide

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