SMTL ID : 7yxr.2 (1 other biounit)

Crystal structure of mutant AncGR2-LBD (Y545A) bound to dexamethasone and SHP coregulator fragment

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-mer

Ligands

1 x DEX: DEXAMETHASONE(Non-covalent)

DEX.1: 18 residues within 4Å: Chain A: M.33, L.36, N.37, G.40, Q.43, W.73, M.74, M.77, A.78, R.84, F.96, Q.115, L.205, F.208, C.209, T.212, V.220, F.222 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.36, A:W.73, A:M.77, A:Q.115, A:F.208 Hydrogen bonds: A:N.37, A:Q.43, A:R.84, A:T.212

3 x FMT: FORMIC ACID(Non-functional Binders)

FMT.2: 5 residues within 4Å: Chain A: V.16, Q.88, C.95, A.97, P.98 No protein-ligand interaction detected (PLIP) FMT.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) FMT.4: 2 residues within 4Å: Chain B: S.11, S.12 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.12, B:S.12

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jimenez-Panizo, A. et al., The multivalency of the glucocorticoid receptor ligand-binding domain explains its manifold physiological activities. Nucleic Acids Res. (2022)

Release Date

2022-12-07

Peptides

Ancestral Glucocorticoid Receptor2: A
SHP NR Box 1 Peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
S

Ancestral Glucocorticoid Receptor2

SHP NR Box 1 Peptide

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