SMTL ID : 7yxd.3 (3 other biounits)

Crystal structure of WT AncGR2-LBD bound to dexamethasone and SHP coregulator fragment

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

1 x DEX: DEXAMETHASONE(Non-covalent)

DEX.1: 20 residues within 4Å: Chain A: M.32, L.35, N.36, L.38, G.39, Q.42, M.73, M.76, A.77, L.80, R.83, F.95, Q.114, M.118, L.204, F.207, C.208, T.211, V.219, F.221 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.35, A:L.38, A:M.76, A:F.95, A:Q.114, A:L.204, A:F.207 Hydrogen bonds: A:N.36, A:Q.42, A:R.83, A:T.211

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 3 residues within 4Å: Chain A: T.27, T.29, R.30 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.27, A:R.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jimenez-Panizo, A. et al., The multivalency of the glucocorticoid receptor ligand-binding domain explains its manifold physiological activities. Nucleic Acids Res. (2022)

Release Date

2022-12-07

Peptides

Ancestral Glucocorticoid Receptor2: A
SHP NR Box 1 Peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
J

Ancestral Glucocorticoid Receptor2

SHP NR Box 1 Peptide

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