- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x PNS: 4'-PHOSPHOPANTETHEINE(Non-covalent)
- 6 x APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER(Non-covalent)
APC.2: 16 residues within 4Å:- Chain A: P.8, G.9, S.10, F.11, G.17, H.18, V.21, K.88, G.89, R.91, E.99, T.119, Y.123, V.126, S.128
- Ligands: PNS.1
14 PLIP interactions:14 interactions with chain A- Hydrogen bonds: A:S.10, A:S.10, A:F.11, A:G.89, A:E.99, A:E.99, A:T.119, A:V.126, A:S.128
- Water bridges: A:D.12, A:T.15, A:S.128
- Salt bridges: A:K.88
- pi-Stacking: A:H.18
APC.4: 15 residues within 4Å:- Chain B: G.9, S.10, F.11, G.17, H.18, V.21, G.89, R.91, T.119, Y.123, V.126, S.127, S.128, S.129
- Ligands: PNS.3
12 PLIP interactions:12 interactions with chain B- Hydrogen bonds: B:S.10, B:S.10, B:F.11, B:G.89, B:R.91, B:T.119, B:V.126, B:S.127, B:S.128, B:S.129
- Water bridges: B:D.12
- Salt bridges: B:R.91
APC.6: 15 residues within 4Å:- Chain C: G.9, S.10, F.11, G.17, H.18, V.21, G.89, R.91, T.119, Y.123, V.126, S.127, S.128, S.129
- Ligands: PNS.5
11 PLIP interactions:11 interactions with chain C- Hydrogen bonds: C:S.10, C:S.10, C:F.11, C:G.89, C:R.91, C:T.119, C:V.126, C:S.128, C:S.128, C:S.129, C:S.129
APC.8: 16 residues within 4Å:- Chain D: P.8, G.9, S.10, F.11, G.17, H.18, V.21, K.88, G.89, R.91, E.99, T.119, Y.123, V.126, S.128
- Ligands: PNS.7
14 PLIP interactions:14 interactions with chain D- Hydrogen bonds: D:S.10, D:S.10, D:F.11, D:G.89, D:E.99, D:E.99, D:E.99, D:T.119, D:V.126, D:S.128
- Water bridges: D:D.12, D:S.128
- Salt bridges: D:K.88
- pi-Stacking: D:H.18
APC.10: 15 residues within 4Å:- Chain E: G.9, S.10, F.11, G.17, H.18, V.21, G.89, R.91, T.119, Y.123, V.126, S.127, S.128, S.129
- Ligands: PNS.9
12 PLIP interactions:12 interactions with chain E- Hydrogen bonds: E:S.10, E:S.10, E:F.11, E:G.89, E:R.91, E:T.119, E:V.126, E:S.127, E:S.128, E:S.129
- Water bridges: E:D.12
- Salt bridges: E:R.91
APC.12: 15 residues within 4Å:- Chain F: G.9, S.10, F.11, G.17, H.18, V.21, G.89, R.91, T.119, Y.123, V.126, S.127, S.128, S.129
- Ligands: PNS.11
11 PLIP interactions:11 interactions with chain F- Hydrogen bonds: F:S.10, F:S.10, F:F.11, F:G.89, F:R.91, F:T.119, F:V.126, F:S.128, F:S.128, F:S.129, F:S.129
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Thomas, S.E. et al., Structural Characterization of Mycobacterium abscessus Phosphopantetheine Adenylyl Transferase Ligand Interactions: Implications for Fragment-Based Drug Design. Front Mol Biosci (2022)
- Release Date
- 2022-06-29
- Peptides
- Phosphopantetheine adenylyltransferase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
AE
BF
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x PNS: 4'-PHOSPHOPANTETHEINE(Non-covalent)
- 6 x APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Thomas, S.E. et al., Structural Characterization of Mycobacterium abscessus Phosphopantetheine Adenylyl Transferase Ligand Interactions: Implications for Fragment-Based Drug Design. Front Mol Biosci (2022)
- Release Date
- 2022-06-29
- Peptides
- Phosphopantetheine adenylyltransferase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
AE
BF
C