SMTL ID : 7z4l.1

SpCas9 bound to 18-nucleotide complementary DNA substrate in the checkpoint state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-functional Binders)

MG.1: 3 residues within 4Å: Chain A: U.52, A.53, G.64 No protein-ligand interaction detected (PLIP)

2 x K: POTASSIUM ION(Non-covalent)

K.2: 4 residues within 4Å: Chain A: U.68, C.69 Chain B: V.1100, T.1102 No protein-ligand interaction detected (PLIP) K.3: 3 residues within 4Å: Chain A: A.70 Chain B: T.1098, Q.1350 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:Q.1350

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pacesa, M. et al., R-loop formation and conformational activation mechanisms of Cas9. Nature (2022)

Release Date

2022-08-31

Peptides

CRISPR-associated endonuclease Cas9/Csn1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

B
B

CRISPR-associated endonuclease Cas9/Csn1

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