SMTL ID : 7zau.4 (3 other biounits)

Fascin-1 in complex with Nb 3E11

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: A.185, F.186, S.415, Y.416 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:F.186, A:S.415, A:Y.416, A:Y.416 EDO.2: 6 residues within 4Å: Chain A: Q.271, A.272, A.273, R.349, L.380, L.382 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.349, A:L.380, A:L.382 EDO.4: 5 residues within 4Å: Chain B: Y.62, K.67, G.68, F.70, T.71 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:G.68, B:T.71

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 7 residues within 4Å: Chain A: Q.271, N.277, D.291, E.293 Chain B: T.58, T.59, T.60 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:N.277, B:T.58 Water bridges: A:K.384, B:T.58, B:T.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Burgess, S.G. et al., A nanobody inhibitor of Fascin-1 actin-bundling activity and filopodia formation. Open Biology (2024)

Release Date

2023-09-27

Peptides

Fascin: A
Nanobody 3E11: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

Fascin

Nanobody 3E11

Related Entries With Identical Sequence