SMTL ID : 7ze8.1

PucE-LH2 complex from Rps. palustris

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-9-9-1-mer

Ligands

33 x BCL: BACTERIOCHLOROPHYLL A(Covalent)(Non-covalent)

BCL.1: 28 residues within 4Å: Chain A: P.17, L.20, G.21, V.23, T.24, A.27, H.31, V.34, W.40, F.41, Y.44, W.45 Chain B: F.32, I.35, A.36, A.39, H.40 Chain Q: I.6, W.7, L.18, L.19, S.22, V.23, V.30 Ligands: IRM.3, BCL.5, BCL.34, BCL.36 16 PLIP interactions: 9 interactions with chain A, 1 interactions with chain B, 6 interactions with chain Q, Hydrophobic interactions: A:V.23, A:V.34, A:W.40, A:F.41, A:F.41, A:Y.44, A:W.45, B:A.39, Q:I.6, Q:W.7, Q:L.18, Q:L.19, Q:V.23, Q:V.30 pi-Stacking: A:F.41 Metal complexes: A:H.31 BCL.2: 14 residues within 4Å: Chain A: M.1, N.2, Q.3 Chain B: V.25, I.26, T.29, R.30 Chain C: L.20 Chain D: G.28, I.31 Ligands: IRM.4, BCL.5, BCL.6, IRM.9 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain D, Hydrophobic interactions: B:V.25, B:I.26, B:R.30, D:I.31 Hydrogen bonds: B:R.30 BCL.5: 19 residues within 4Å: Chain A: V.23, I.26, A.27, V.30, H.31 Chain B: T.29, F.32, G.33, A.36, H.40, A.43, W.49 Chain C: Y.44, W.45 Chain D: F.32 Ligands: BCL.1, BCL.2, IRM.4, BCL.6 5 PLIP interactions: 1 interactions with chain D, 3 interactions with chain B, 1 interactions with chain A, Hydrophobic interactions: D:F.32, B:T.29, B:A.43, A:V.30 Metal complexes: B:H.40 BCL.6: 25 residues within 4Å: Chain A: I.6, W.7, G.15, L.18, S.22 Chain C: P.17, L.20, G.21, T.24, A.27, H.31, V.34, W.40, F.41, Y.44, W.45 Chain D: F.32, I.35, A.36, A.39, H.40 Ligands: BCL.2, IRM.4, BCL.5, BCL.10 14 PLIP interactions: 2 interactions with chain D, 3 interactions with chain A, 9 interactions with chain C, Hydrophobic interactions: D:A.39, A:I.6, A:W.7, A:L.18, C:L.20, C:V.34, C:W.40, C:F.41, C:F.41, C:F.41, C:Y.44, C:W.45 Hydrogen bonds: D:H.40 Metal complexes: C:H.31 BCL.7: 15 residues within 4Å: Chain C: M.1, Q.3 Chain D: V.25, I.26, T.29, R.30, I.37 Chain E: L.20 Chain F: G.28, I.31 Chain S: H.8 Ligands: IRM.8, IRM.9, BCL.10, BCL.11 6 PLIP interactions: 5 interactions with chain D, 1 interactions with chain F, Hydrophobic interactions: D:V.25, D:I.26, D:R.30, D:I.37, F:I.31 Hydrogen bonds: D:R.30 BCL.10: 22 residues within 4Å: Chain C: V.23, I.26, A.27, V.30, H.31 Chain D: T.29, F.32, G.33, A.36, H.40, A.43, W.49 Chain E: Y.44, W.45 Chain F: G.28, F.32, I.35 Ligands: BCL.6, BCL.7, IRM.8, IRM.9, BCL.11 8 PLIP interactions: 4 interactions with chain D, 3 interactions with chain F, 1 interactions with chain C, Hydrophobic interactions: D:F.32, D:A.43, D:W.49, F:F.32, F:F.32, F:I.35, C:V.30 Metal complexes: D:H.40 BCL.11: 26 residues within 4Å: Chain C: W.7, V.10, G.15, L.19, S.22, V.23, V.30 Chain E: P.17, L.20, G.21, T.24, A.27, H.31, W.40, F.41, Y.44, W.45 Chain F: F.32, I.35, A.36, A.39, H.40 Ligands: BCL.7, IRM.9, BCL.10, BCL.13 16 PLIP interactions: 2 interactions with chain F, 8 interactions with chain E, 6 interactions with chain C, Hydrophobic interactions: F:A.39, E:L.20, E:W.40, E:F.41, E:F.41, E:F.41, E:Y.44, E:W.45, C:W.7, C:W.7, C:V.10, C:L.19, C:V.23, C:V.30 Hydrogen bonds: F:H.40 Metal complexes: E:H.31 BCL.12: 19 residues within 4Å: Chain E: M.1, N.2, Q.3 Chain F: V.25, I.26, T.29, R.30 Chain G: L.20 Chain H: G.28, I.31, I.35, V.38, L.42 Ligands: IRM.8, BCL.13, BCL.14, IRM.17, BCL.41, BCL.42 8 PLIP interactions: 4 interactions with chain H, 4 interactions with chain F, Hydrophobic interactions: H:I.31, H:I.35, H:V.38, H:L.42, F:V.25, F:I.26, F:R.30 Hydrogen bonds: F:R.30 BCL.13: 24 residues within 4Å: Chain E: V.23, I.26, A.27, V.30, H.31 Chain F: T.29, F.32, G.33, A.36, H.40, A.43, W.49 Chain G: Y.44, W.45 Chain H: G.28, I.31, F.32, I.35 Ligands: IRM.8, BCL.11, BCL.12, BCL.14, IRM.17, BCL.42 9 PLIP interactions: 5 interactions with chain F, 3 interactions with chain H, 1 interactions with chain E, Hydrophobic interactions: F:T.29, F:A.43, F:W.49, F:W.49, H:I.31, H:F.32, H:I.35, E:V.30 Metal complexes: F:H.40 BCL.14: 27 residues within 4Å: Chain E: W.7, V.10, G.15, L.19, S.22, V.23, V.30 Chain G: P.17, L.20, G.21, T.24, A.27, H.31, V.34, W.40, F.41, Y.44, W.45 Chain H: F.32, I.35, A.36, A.39, H.40 Ligands: IRM.8, BCL.12, BCL.13, BCL.18 17 PLIP interactions: 2 interactions with chain H, 10 interactions with chain G, 5 interactions with chain E, Hydrophobic interactions: H:A.39, G:L.20, G:V.34, G:W.40, G:F.41, G:F.41, G:F.41, G:Y.44, G:W.45, E:W.7, E:V.10, E:L.19, E:V.23, E:V.30 Hydrogen bonds: H:H.40 pi-Stacking: G:F.41 Metal complexes: G:H.31 BCL.15: 16 residues within 4Å: Chain G: M.1, Q.3 Chain H: V.25, I.26, T.29, R.30 Chain I: L.20 Chain J: G.28, I.31, I.35 Ligands: IRM.16, IRM.17, BCL.18, BCL.19, BCL.40, BCL.41 5 PLIP interactions: 4 interactions with chain H, 1 interactions with chain J, Hydrophobic interactions: H:V.25, H:I.26, H:R.30, J:I.35 Hydrogen bonds: H:R.30 BCL.18: 23 residues within 4Å: Chain G: V.23, I.26, A.27, V.30, H.31 Chain H: T.29, F.32, G.33, A.36, H.40, A.43, W.49 Chain I: Y.44, W.45 Chain J: G.28, F.32, I.35 Ligands: BCL.14, BCL.15, IRM.16, IRM.17, BCL.19, BCL.41 9 PLIP interactions: 6 interactions with chain H, 1 interactions with chain G, 2 interactions with chain J, Hydrophobic interactions: H:T.29, H:F.32, H:A.43, H:W.49, H:W.49, G:V.30, J:F.32, J:I.35 Metal complexes: H:H.40 BCL.19: 26 residues within 4Å: Chain G: I.6, W.7, G.15, L.18, L.19, S.22, V.30 Chain I: L.20, G.21, T.24, A.27, H.31, V.34, W.40, F.41, Y.44, W.45 Chain J: F.32, I.35, A.36, A.39, H.40 Ligands: BCL.15, IRM.17, BCL.18, BCL.22 17 PLIP interactions: 5 interactions with chain G, 10 interactions with chain I, 2 interactions with chain J, Hydrophobic interactions: G:I.6, G:W.7, G:L.18, G:L.19, G:V.30, I:L.20, I:L.20, I:V.34, I:W.40, I:F.41, I:F.41, I:F.41, I:Y.44, I:W.45, J:A.39 Metal complexes: I:H.31 Hydrogen bonds: J:H.40 BCL.20: 13 residues within 4Å: Chain I: M.1, N.2, Q.3 Chain J: T.29, R.30 Chain K: L.20 Chain L: G.28, I.31 Ligands: IRM.16, IRM.21, BCL.22, BCL.23, BCL.40 3 PLIP interactions: 1 interactions with chain L, 2 interactions with chain J, Hydrophobic interactions: L:I.31, J:R.30 Hydrogen bonds: J:R.30 BCL.22: 21 residues within 4Å: Chain I: V.23, I.26, A.27, V.30, H.31 Chain J: T.29, F.32, G.33, A.36, H.40, A.43, W.49 Chain K: Y.44, W.45 Chain L: F.32 Ligands: IRM.16, BCL.19, BCL.20, IRM.21, BCL.23, BCL.40 6 PLIP interactions: 4 interactions with chain J, 1 interactions with chain L, 1 interactions with chain I, Hydrophobic interactions: J:T.29, J:A.43, J:W.49, L:F.32, I:V.30 Metal complexes: J:H.40 BCL.23: 27 residues within 4Å: Chain I: I.6, W.7, G.15, L.18, L.19, S.22, V.23 Chain K: P.17, L.20, G.21, T.24, A.27, H.31, V.34, W.40, F.41, Y.44, W.45 Chain L: F.32, I.35, A.36, A.39, H.40 Ligands: IRM.16, BCL.20, BCL.22, BCL.26 14 PLIP interactions: 9 interactions with chain K, 4 interactions with chain I, 1 interactions with chain L, Hydrophobic interactions: K:L.20, K:V.34, K:W.40, K:F.41, K:F.41, K:F.41, K:Y.44, K:W.45, I:I.6, I:W.7, I:L.18, I:V.23, L:A.39 Metal complexes: K:H.31 BCL.24: 16 residues within 4Å: Chain K: M.1, Q.3 Chain L: V.25, I.26, T.29, R.30 Chain M: L.20 Chain N: G.28, I.31, I.35 Chain S: F.72 Ligands: IRM.21, IRM.25, BCL.26, BCL.28, BCL.39 9 PLIP interactions: 4 interactions with chain L, 2 interactions with chain S, 3 interactions with chain N, Hydrophobic interactions: L:V.25, L:I.26, L:R.30, S:F.72, S:F.72, N:I.31, N:I.35, N:I.35 Hydrogen bonds: L:R.30 BCL.26: 23 residues within 4Å: Chain K: V.23, I.26, A.27, V.30, H.31 Chain L: T.29, F.32, G.33, A.36, H.40, A.43, W.49 Chain M: Y.44, W.45 Chain N: G.28, I.31, F.32 Ligands: IRM.21, BCL.23, BCL.24, IRM.25, BCL.28, BCL.39 8 PLIP interactions: 3 interactions with chain N, 4 interactions with chain L, 1 interactions with chain K, Hydrophobic interactions: N:I.31, N:F.32, N:F.32, L:T.29, L:A.43, L:W.49, K:V.30 Metal complexes: L:H.40 BCL.27: 15 residues within 4Å: Chain M: M.1, Q.3 Chain N: V.25, T.29, R.30 Chain O: L.20 Chain P: G.28, I.31, I.35 Chain S: F.88 Ligands: IRM.25, BCL.29, BCL.30, IRM.32, BCL.38 7 PLIP interactions: 1 interactions with chain S, 4 interactions with chain N, 2 interactions with chain P, Hydrophobic interactions: S:F.88, N:V.25, N:T.29, N:R.30, P:I.31, P:I.35 Hydrogen bonds: N:R.30 BCL.28: 26 residues within 4Å: Chain K: I.6, W.7, G.15, L.18, S.22, V.23 Chain M: P.17, L.20, G.21, T.24, A.27, H.31, V.34, W.40, F.41, Y.44, W.45 Chain N: F.32, I.35, A.36, A.39, H.40 Ligands: IRM.21, BCL.24, BCL.26, BCL.29 16 PLIP interactions: 2 interactions with chain N, 4 interactions with chain K, 10 interactions with chain M, Hydrophobic interactions: N:A.39, K:I.6, K:W.7, K:L.18, K:V.23, M:L.20, M:L.20, M:V.34, M:W.40, M:F.41, M:F.41, M:F.41, M:Y.44, M:W.45 Hydrogen bonds: N:H.40 Metal complexes: M:H.31 BCL.29: 23 residues within 4Å: Chain M: V.23, I.26, A.27, V.30, H.31 Chain N: T.29, F.32, G.33, A.36, H.40, A.43, W.49 Chain O: Y.44, W.45 Chain P: I.31, F.32, I.35 Ligands: IRM.25, BCL.27, BCL.28, BCL.30, IRM.32, BCL.38 7 PLIP interactions: 3 interactions with chain N, 3 interactions with chain P, 1 interactions with chain M, Hydrophobic interactions: N:T.29, N:A.43, P:I.31, P:F.32, P:I.35, M:V.30 Metal complexes: N:H.40 BCL.30: 27 residues within 4Å: Chain M: I.6, W.7, G.15, L.18, L.19, S.22, V.23, V.30 Chain O: L.20, G.21, T.24, A.27, H.31, V.34, W.40, F.41, Y.44, W.45 Chain P: F.32, I.35, A.36, A.39, H.40 Ligands: IRM.25, BCL.27, BCL.29, BCL.33 18 PLIP interactions: 6 interactions with chain M, 2 interactions with chain P, 10 interactions with chain O, Hydrophobic interactions: M:I.6, M:W.7, M:L.18, M:L.19, M:V.23, M:V.30, P:A.39, O:L.20, O:L.20, O:V.34, O:W.40, O:F.41, O:F.41, O:F.41, O:Y.44, O:W.45 Hydrogen bonds: P:H.40 Metal complexes: O:H.31 BCL.31: 14 residues within 4Å: Chain O: M.1, N.2, Q.3 Chain P: I.26, T.29, R.30 Chain Q: L.20 Chain R: G.28, I.31 Ligands: IRM.3, IRM.32, BCL.33, BCL.35, BCL.37 4 PLIP interactions: 4 interactions with chain P, Hydrophobic interactions: P:I.26, P:T.29, P:R.30 Hydrogen bonds: P:R.30 BCL.33: 23 residues within 4Å: Chain O: V.23, I.26, A.27, V.30, H.31 Chain P: T.29, F.32, G.33, A.36, H.40, A.43, W.49 Chain Q: Y.44, W.45 Chain R: G.28, F.32, I.35 Ligands: IRM.3, BCL.30, BCL.31, IRM.32, BCL.35, BCL.37 10 PLIP interactions: 3 interactions with chain R, 2 interactions with chain O, 5 interactions with chain P, Hydrophobic interactions: R:F.32, R:F.32, R:I.35, O:V.30, P:F.32, P:A.43, P:W.49, P:W.49 Hydrogen bonds: O:H.31 Metal complexes: P:H.40 BCL.34: 12 residues within 4Å: Chain A: L.20 Chain B: G.28, I.31, I.35 Chain Q: M.1, Q.3 Chain R: T.29, R.30 Ligands: BCL.1, IRM.3, IRM.4, BCL.36 3 PLIP interactions: 2 interactions with chain R, 1 interactions with chain B, Hydrophobic interactions: R:R.30, B:I.35 Hydrogen bonds: R:R.30 BCL.35: 26 residues within 4Å: Chain O: I.6, W.7, G.15, L.18, L.19, S.22, V.23, V.30 Chain Q: L.20, G.21, T.24, A.27, H.31, V.34, W.40, F.41, W.45 Chain R: F.32, I.35, A.36, A.39, H.40 Ligands: BCL.31, IRM.32, BCL.33, BCL.36 15 PLIP interactions: 8 interactions with chain Q, 6 interactions with chain O, 1 interactions with chain R, Hydrophobic interactions: Q:L.20, Q:V.34, Q:W.40, Q:F.41, Q:F.41, Q:W.45, O:I.6, O:W.7, O:L.18, O:L.19, O:V.23, O:V.30, R:A.39 pi-Stacking: Q:F.41 Metal complexes: Q:H.31 BCL.36: 20 residues within 4Å: Chain A: Y.44, W.45 Chain B: I.35 Chain Q: V.23, I.26, A.27, V.30, H.31 Chain R: T.29, F.32, G.33, A.36, H.40, A.43, W.49 Ligands: BCL.1, IRM.3, IRM.4, BCL.34, BCL.35 6 PLIP interactions: 4 interactions with chain R, 1 interactions with chain Q, 1 interactions with chain B, Hydrophobic interactions: R:T.29, R:F.32, R:A.43, Q:V.30, B:I.35 Metal complexes: R:H.40 BCL.37: 9 residues within 4Å: Chain P: R.30, A.34, V.38 Chain S: S.89, G.90, Y.91, P.92 Ligands: BCL.31, BCL.33 3 PLIP interactions: 2 interactions with chain S, 1 interactions with chain P, Hydrogen bonds: S:Y.91 Metal complexes: S:S.89 Hydrophobic interactions: P:V.38 BCL.38: 11 residues within 4Å: Chain N: R.30, G.33, A.34, V.38 Chain S: F.72, S.73, G.74, A.75, P.76 Ligands: BCL.27, BCL.29 4 PLIP interactions: 2 interactions with chain N, 2 interactions with chain S, Hydrophobic interactions: N:A.34, N:V.38 Hydrogen bonds: S:A.75 Metal complexes: S:S.73 BCL.39: 9 residues within 4Å: Chain L: R.30, A.34, I.37 Chain S: S.57, G.58, T.59, P.60 Ligands: BCL.24, BCL.26 5 PLIP interactions: 3 interactions with chain L, 2 interactions with chain S, Hydrophobic interactions: L:R.30, L:A.34, L:I.37 Hydrogen bonds: S:T.59 Metal complexes: S:S.57 BCL.40: 12 residues within 4Å: Chain J: R.30, A.34, I.37, V.38 Chain S: Y.40, S.41, G.42, T.43, P.44 Ligands: BCL.15, BCL.20, BCL.22 7 PLIP interactions: 5 interactions with chain J, 2 interactions with chain S, Hydrophobic interactions: J:R.30, J:R.30, J:A.34, J:I.37, J:V.38 Hydrogen bonds: S:T.43 Metal complexes: S:S.41 BCL.41: 12 residues within 4Å: Chain H: R.30, I.31, A.34, V.38 Chain S: Y.24, S.25, G.26, E.27, P.28 Ligands: BCL.12, BCL.15, BCL.18 6 PLIP interactions: 2 interactions with chain S, 4 interactions with chain H, Hydrogen bonds: S:E.27 Metal complexes: S:S.25 Hydrophobic interactions: H:R.30, H:R.30, H:A.34, H:V.38 BCL.42: 10 residues within 4Å: Chain F: R.30, A.34, V.38 Chain S: H.8, S.9, G.10, H.11, P.12 Ligands: BCL.12, BCL.13 6 PLIP interactions: 4 interactions with chain F, 2 interactions with chain S, Hydrophobic interactions: F:R.30, F:R.30, F:A.34, F:V.38 Hydrogen bonds: S:H.11 Metal complexes: S:S.9

9 x IRM: 1,2-Dihydro-psi,psi-caroten-1-ol(Non-covalent)

IRM.3: 22 residues within 4Å: Chain A: H.31, F.32, W.45 Chain O: Q.3, R.5, I.6, V.9 Chain P: W.9 Chain Q: L.20, V.23, I.26, A.33 Chain R: E.20, L.21, H.24, G.28, T.29 Ligands: BCL.1, BCL.31, BCL.33, BCL.34, BCL.36 12 PLIP interactions: 4 interactions with chain O, 4 interactions with chain Q, 3 interactions with chain A, 1 interactions with chain R Hydrophobic interactions: O:R.5, O:I.6, O:I.6, O:V.9, Q:L.20, Q:V.23, Q:I.26, Q:A.33, A:H.31, A:F.32, A:W.45, R:H.24 IRM.4: 26 residues within 4Å: Chain A: L.19, L.20, V.23, I.26, V.30, A.33 Chain B: E.17, E.20, L.21, H.24, G.28, T.29 Chain C: I.28, H.31, F.32, W.45 Chain Q: Q.3, R.5, I.6, V.9 Chain R: W.9 Ligands: BCL.2, BCL.5, BCL.6, BCL.34, BCL.36 17 PLIP interactions: 2 interactions with chain B, 5 interactions with chain A, 4 interactions with chain C, 5 interactions with chain Q, 1 interactions with chain R Hydrophobic interactions: B:L.21, B:H.24, A:L.20, A:V.23, A:I.26, A:V.30, A:A.33, C:I.28, C:H.31, C:F.32, C:W.45, Q:Q.3, Q:I.6, Q:I.6, Q:V.9, Q:V.9, R:W.9 IRM.8: 23 residues within 4Å: Chain C: Q.3, R.5, I.6, V.9 Chain D: W.9 Chain E: L.20, V.23, I.26, L.29, A.33 Chain F: E.20, L.21, H.24, T.29, F.32 Chain G: H.31, F.32, W.45 Ligands: BCL.7, BCL.10, BCL.12, BCL.13, BCL.14 17 PLIP interactions: 4 interactions with chain E, 3 interactions with chain F, 3 interactions with chain G, 6 interactions with chain C, 1 interactions with chain D Hydrophobic interactions: E:L.20, E:V.23, E:I.26, E:A.33, F:E.20, F:H.24, F:F.32, G:H.31, G:F.32, G:W.45, C:Q.3, C:I.6, C:I.6, C:I.6, C:V.9, C:V.9, D:W.9 IRM.9: 25 residues within 4Å: Chain A: Q.3, R.5, I.6, V.9 Chain B: W.9 Chain C: L.20, V.23, I.26, L.29, V.30, A.33 Chain D: E.20, L.21, H.24, G.28, T.29, F.32 Chain E: I.28, H.31, F.32, W.45 Ligands: BCL.2, BCL.7, BCL.10, BCL.11 16 PLIP interactions: 3 interactions with chain D, 1 interactions with chain B, 4 interactions with chain E, 3 interactions with chain A, 5 interactions with chain C Hydrophobic interactions: D:E.20, D:H.24, D:F.32, B:W.9, E:I.28, E:H.31, E:F.32, E:W.45, A:I.6, A:I.6, A:V.9, C:L.20, C:V.23, C:I.26, C:V.30, C:A.33 IRM.16: 24 residues within 4Å: Chain G: Q.3, R.5, I.6, T.8, V.9 Chain H: W.9 Chain I: L.20, V.23, I.26, V.30, A.33 Chain J: E.20, L.21, H.24, G.28, T.29 Chain K: H.31, F.32, W.45 Ligands: BCL.15, BCL.18, BCL.20, BCL.22, BCL.23 14 PLIP interactions: 3 interactions with chain K, 5 interactions with chain I, 4 interactions with chain G, 1 interactions with chain H, 1 interactions with chain J Hydrophobic interactions: K:H.31, K:F.32, K:W.45, I:L.20, I:V.23, I:I.26, I:V.30, I:A.33, G:Q.3, G:I.6, G:I.6, G:V.9, H:W.9, J:H.24 IRM.17: 23 residues within 4Å: Chain E: Q.3, R.5, I.6, V.9 Chain F: W.9 Chain G: L.20, V.23, I.26, A.33 Chain H: E.20, L.21, H.24, V.25, G.28, T.29 Chain I: H.31, F.32, W.45 Ligands: BCL.12, BCL.13, BCL.15, BCL.18, BCL.19 16 PLIP interactions: 3 interactions with chain I, 2 interactions with chain H, 4 interactions with chain G, 7 interactions with chain E Hydrophobic interactions: I:H.31, I:F.32, I:W.45, H:L.21, H:H.24, G:L.20, G:V.23, G:I.26, G:A.33, E:Q.3, E:R.5, E:I.6, E:I.6, E:I.6, E:V.9, E:V.9 IRM.21: 27 residues within 4Å: Chain I: Q.3, R.5, I.6, V.9 Chain J: W.9 Chain K: L.16, L.19, L.20, V.23, I.26, V.30, A.33 Chain L: E.20, L.21, H.24, V.25, G.28, T.29 Chain M: I.28, H.31, F.32, W.45 Ligands: BCL.20, BCL.22, BCL.24, BCL.26, BCL.28 16 PLIP interactions: 3 interactions with chain I, 7 interactions with chain K, 4 interactions with chain M, 1 interactions with chain J, 1 interactions with chain L Hydrophobic interactions: I:Q.3, I:I.6, I:V.9, K:L.16, K:L.16, K:L.20, K:V.23, K:I.26, K:V.30, K:A.33, M:I.28, M:H.31, M:F.32, M:W.45, J:W.9, L:H.24 IRM.25: 26 residues within 4Å: Chain K: Q.3, R.5, I.6, T.8, V.9 Chain L: W.9 Chain M: L.20, V.23, I.26, L.29, A.33 Chain N: E.17, E.20, L.21, H.24, G.28, T.29 Chain O: I.28, H.31, F.32, W.45 Ligands: BCL.24, BCL.26, BCL.27, BCL.29, BCL.30 17 PLIP interactions: 4 interactions with chain O, 4 interactions with chain M, 5 interactions with chain K, 3 interactions with chain N, 1 interactions with chain L Hydrophobic interactions: O:I.28, O:H.31, O:F.32, O:W.45, M:L.20, M:V.23, M:I.26, M:A.33, K:Q.3, K:I.6, K:I.6, K:V.9, K:V.9, N:E.20, N:L.21, N:H.24, L:W.9 IRM.32: 25 residues within 4Å: Chain M: Q.3, R.5, I.6, V.9 Chain N: W.9 Chain O: L.20, V.23, I.26, A.33 Chain P: E.17, E.20, L.21, H.24, G.28, T.29, F.32 Chain Q: I.28, H.31, F.32, W.45 Ligands: BCL.27, BCL.29, BCL.31, BCL.33, BCL.35 17 PLIP interactions: 4 interactions with chain O, 4 interactions with chain Q, 4 interactions with chain P, 1 interactions with chain N, 4 interactions with chain M Hydrophobic interactions: O:L.20, O:V.23, O:I.26, O:A.33, Q:I.28, Q:H.31, Q:F.32, Q:W.45, P:L.21, P:H.24, P:T.29, P:F.32, N:W.9, M:I.6, M:I.6, M:I.6, M:V.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Qian, P. et al., Cryo-EM structures of light-harvesting 2 complexes from Rhodopseudomonas palustris reveal the molecular origin of absorption tuning. Proc.Natl.Acad.Sci.USA (2022)

Release Date

2022-10-05

Peptides

Light-harvesting protein: ACEGIKMOQ
Light-harvesting protein: BDFHJLNPR
PucA-LH2-gamma: S

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

E
E

G
G

I
I

K
K

M
M

O
O

Q
Q

B
B

D
D

F
F

H
H

J
J

L
L

N
N

P
P

R
R

S
S

Membrane

We predict this structure to be a membrane protein.
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Light-harvesting protein

Light-harvesting protein

PucA-LH2-gamma

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