- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x PO4: PHOSPHATE ION(Non-functional Binders)
- 4 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.6: 6 residues within 4Å:- Chain A: F.45, Q.48, A.49, F.243, V.261
- Ligands: PO4.3
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:F.45, A:F.45, A:F.45, A:A.49, A:F.243, A:F.243, A:V.261
MPD.7: 5 residues within 4Å:- Chain A: V.22, Y.23, Y.198, Q.200, V.214
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:V.22, A:Y.198, A:V.214
MPD.10: 6 residues within 4Å:- Chain B: Q.48, A.49, A.52, R.53, F.243, E.248
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:A.52, B:F.243, B:E.248
- Hydrogen bonds: B:R.53
MPD.11: 9 residues within 4Å:- Chain B: W.34, E.36, A.125, Y.129, E.158, W.167, W.183, F.185, L.220
7 PLIP interactions:7 interactions with chain B- Hydrophobic interactions: B:W.34, B:A.125, B:F.185, B:L.220
- Hydrogen bonds: B:E.36
- Water bridges: B:E.158, B:E.158
- 2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)
SAH.8: 15 residues within 4Å:- Chain A: R.39, C.64, C.65, G.66, M.70, D.85, R.86, M.90, I.107, E.108, L.109, T.123, A.124, A.126, Q.130
17 PLIP interactions:17 interactions with chain A- Hydrophobic interactions: A:A.124
- Hydrogen bonds: A:E.62, A:C.64, A:G.66, A:M.70, A:R.86, A:L.109, A:L.109, A:T.123, A:Q.130
- Water bridges: A:T.67, A:G.68, A:G.68, A:L.69, A:T.123
- Salt bridges: A:R.39
- pi-Cation interactions: A:R.86
SAH.12: 15 residues within 4Å:- Chain B: R.39, C.64, C.65, G.66, L.69, M.70, D.85, R.86, M.90, I.107, E.108, L.109, T.123, A.124, Q.130
11 PLIP interactions:11 interactions with chain B- Hydrophobic interactions: B:A.124
- Hydrogen bonds: B:C.64, B:R.86, B:L.109, B:L.109, B:T.123, B:Q.130
- Water bridges: B:C.65, B:M.70
- Salt bridges: B:R.39
- pi-Cation interactions: B:R.86
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Amariei, D.A. et al., Enzymatic C3-Methylation of Indoles Using Methyltransferase PsmD-Crystal Structure, Catalytic Mechanism, and Preparative Applications. Acs Catalysis (2022)
- Release Date
- 2022-12-28
- Peptides
- Methyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x PO4: PHOSPHATE ION(Non-functional Binders)
- 4 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- 2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Amariei, D.A. et al., Enzymatic C3-Methylation of Indoles Using Methyltransferase PsmD-Crystal Structure, Catalytic Mechanism, and Preparative Applications. Acs Catalysis (2022)
- Release Date
- 2022-12-28
- Peptides
- Methyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B