SMTL ID : 7zno.1

Crystal Structure of Unlinked NS2B_NS3 Protease from Zika Virus in Complex with Boronate Inhibitor MI-2270

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x JQI: [(1R)-1-[[(2S)-6-azanyl-2-[[(2S)-6-azanyl-2-[2-[3-(4-carbamimidamido-3-oxidanylidene-pentyl)phenyl]ethanoylamino]hexanoyl]amino]hexanoyl]amino]-3-methyl-butyl]boronic acid(Covalent)

JQI.1: 20 residues within 4Å: Chain A: S.38, G.39, D.40, F.41, S.42, L.43 Chain B: H.52, D.76, Y.131, A.133, G.134, T.135, S.136, Y.151, G.152, N.153, G.154, V.155, V.156, Y.162 16 PLIP interactions: 15 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:H.52, B:Y.151, B:V.155, B:V.155, B:V.156, B:Y.162, B:Y.162, B:Y.162 Hydrogen bonds: B:H.52, B:G.134, B:S.136, B:G.152, B:G.154, B:G.154, B:Y.162, A:G.39

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Braun, N.J. et al., Boroleucine-Derived Covalent Inhibitors of the ZIKV Protease. Chemmedchem (2023)

Release Date

2022-06-22

Peptides

Serine protease subunit NS2B: A
Serine protease NS3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine protease subunit NS2B

Serine protease NS3

Related Entries With Identical Sequence