- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.50 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 14 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 5 residues within 4Å:- Chain A: T.194, D.196, R.209, R.245
- Ligands: NDP.1
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:T.194, A:T.194
- Water bridges: A:G.195, A:R.209, A:R.245
- Salt bridges: A:R.209, A:R.245
SO4.3: 4 residues within 4Å:- Chain A: S.163, T.222, G.223, A.224
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:S.163, A:G.223, A:A.224
- Water bridges: A:S.163, A:C.164, A:T.165, A:T.166
SO4.4: 4 residues within 4Å:- Chain A: E.267, N.270, R.274, A.308
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:N.270
- Water bridges: A:R.274, A:R.274
- Salt bridges: A:R.274
SO4.5: 1 residues within 4Å:- Chain A: R.90
2 PLIP interactions:2 interactions with chain A- Water bridges: A:R.90
- Salt bridges: A:R.90
SO4.7: 5 residues within 4Å:- Chain B: T.194, D.196, R.209, R.245
- Ligands: NDP.6
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:T.194
- Water bridges: B:G.195, B:R.209, B:R.245
- Salt bridges: B:R.209, B:R.245
SO4.8: 4 residues within 4Å:- Chain B: S.163, T.222, G.223, A.224
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:S.163, B:T.222, B:T.222, B:G.223
- Water bridges: B:R.245, B:R.245, B:R.245, B:R.245, B:R.245
SO4.9: 4 residues within 4Å:- Chain B: E.267, N.270, R.274, A.308
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:N.270
- Water bridges: B:E.267, B:R.274
- Salt bridges: B:R.274
SO4.11: 5 residues within 4Å:- Chain C: T.194, D.196, R.209, R.245
- Ligands: NDP.10
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:T.194, C:T.194
- Water bridges: C:G.195, C:R.209, C:R.245
- Salt bridges: C:R.209, C:R.245
SO4.12: 4 residues within 4Å:- Chain C: S.163, T.222, G.223, A.224
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:S.163, C:G.223, C:A.224
- Water bridges: C:S.163, C:C.164, C:T.165, C:T.166
SO4.13: 4 residues within 4Å:- Chain C: E.267, N.270, R.274, A.308
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:N.270
- Water bridges: C:R.274, C:R.274
- Salt bridges: C:R.274
SO4.14: 1 residues within 4Å:- Chain C: R.90
2 PLIP interactions:2 interactions with chain C- Water bridges: C:R.90
- Salt bridges: C:R.90
SO4.16: 5 residues within 4Å:- Chain D: T.194, D.196, R.209, R.245
- Ligands: NDP.15
6 PLIP interactions:6 interactions with chain D- Hydrogen bonds: D:T.194
- Water bridges: D:G.195, D:R.209, D:R.245
- Salt bridges: D:R.209, D:R.245
SO4.17: 4 residues within 4Å:- Chain D: S.163, T.222, G.223, A.224
9 PLIP interactions:9 interactions with chain D- Hydrogen bonds: D:S.163, D:T.222, D:T.222, D:G.223
- Water bridges: D:R.245, D:R.245, D:R.245, D:R.245, D:R.245
SO4.18: 4 residues within 4Å:- Chain D: E.267, N.270, R.274, A.308
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:N.270
- Water bridges: D:E.267, D:R.274
- Salt bridges: D:R.274
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mattioli, E.J. et al., Structural snapshots of nitrosoglutathione binding and reactivity underlying S-nitrosylation of photosynthetic GAPDH. Redox Biol (2022)
- Release Date
- 2022-07-20
- Peptides
- Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
OB
RC
OD
R
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.50 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 14 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mattioli, E.J. et al., Structural snapshots of nitrosoglutathione binding and reactivity underlying S-nitrosylation of photosynthetic GAPDH. Redox Biol (2022)
- Release Date
- 2022-07-20
- Peptides
- Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
OB
RC
OD
R