SMTL ID : 8a5l.1

TRIM7 PRYSPRY in complex with a 2BC peptide TIEALFQ

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.62 Å

Oligo State

monomer

Ligands

1 x GLU- ALA- LEU- PHE- GLN: 2BC peptide TIEALFQ(Non-covalent)

GLU-ALA-LEU-PHE-GLN.1: 15 residues within 4Å: Chain A: R.22, T.50, N.51, T.52, R.53, G.76, W.77, A.78, L.91, F.94, Q.104, N.106, S.167, V.168, C.169 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:T.50, A:A.78, A:L.91, A:F.94 Hydrogen bonds: A:T.52, A:Q.104, A:S.167, A:S.167, A:C.169 Salt bridges: A:R.53 pi-Cation interactions: A:R.22

1 x TAR: D(-)-TARTARIC ACID(Non-covalent)

TAR.2: 3 residues within 4Å: Chain A: R.87, R.88, K.89 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.88, A:K.89 Water bridges: A:K.89

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Luptak, J. et al., TRIM7 Restricts Coxsackievirus and Norovirus Infection by Detecting the C-Terminal Glutamine Generated by 3C Protease Processing. Viruses (2022)

Release Date

2022-07-06

Peptides

E3 ubiquitin-protein ligase TRIM7: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 ubiquitin-protein ligase TRIM7

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